RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 USP17L12C9JPN9 530 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 USP17L21D6R901 530 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 LZTS3O60299 673 aaPredicted RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 PARNO95453 639 aaKnown RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 LMNAP02545 664 aaKnown RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 SDHBP21912 280 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 SP100P23497 879 aaPredicted RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 AFF1P51825 1210 aaKnown RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 DYNLL1P63167 89 aaKnown RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 PDE4BQ07343 736 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 SLFN5Q08AF3 891 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 TFCP2Q12800 502 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 OS9Q13438 667 aaPredicted RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 PTGISQ16647 500 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 TPRNQ4KMQ1 711 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 FAM83BQ5T0W9 1011 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 LRRC8DQ7L1W4 858 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 METTL16Q86W50 562 aaKnown RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 TSEN2Q8NCE0 465 aaKnown RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 FLCNQ8NFG4 579 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 OR6J1Q8NGC5 347 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 CAGE1Q8TC20 777 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 AFAP1L1Q8TED9 768 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 RIPOR3Q96MK2 946 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 SLF1Q9BQI6 1058 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 GSX2Q9BZM3 304 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 SH2B1Q9NRF2 756 aaPredicted RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 FBXO28Q9NVF7 368 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 MCM9Q9NXL9 1143 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 DMGDHQ9UI17 866 aaKnown RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 PPP1R9AQ9ULJ8 1098 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 PA2G4Q9UQ80 394 aaKnown RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 GRIN2DO15399 1336 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 SPDYE3A6NKU9 549 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 H3BNC9 293 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 ADCY6O43306 1168 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 SRGAP2BP0DMP2 458 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 SHMT1P34896 483 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 RFX5P48382 616 aaPredicted RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 G3BP1Q13283 466 aaKnown RBP eCLIP4.54□□□□□ -1.68
NPM1-210ENST00000523339 MTMR3Q13615 1198 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 PTPN21Q16825 1174 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 KIAA0319Q5VV43 1072 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 IQSEC1Q6DN90 963 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 ZC3H14Q6PJT7 736 aaKnown RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 FBXO11Q86XK2 927 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 CLEC10AQ8IUN9 316 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 FBXO16Q8IX29 292 aaPredicted RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 TMEM192Q8IY95 271 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 FIBCD1Q8N539 461 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 MAGEB6Q8N7X4 407 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 CYP2W1Q8TAV3 490 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 MICAL1Q8TDZ2 1067 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 ZNF384Q8TF68 577 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 PPP1R13LQ8WUF5 828 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 MPHOSPH6Q99547 160 aaKnown RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 HAUS7Q99871 368 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 C11orf84Q9BUA3 381 aaPredicted RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 PHF7Q9BWX1 381 aaPredicted RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 CRNKL1Q9BZJ0 848 aaKnown RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 ACAD9Q9H845 621 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 RAVER2Q9HCJ3 691 aaKnown RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 SWAP70Q9UH65 585 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 NAGPAQ9UK23 515 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 RALYQ9UKM9 306 aaKnown RBP4.54□□□□□ -1.68
NPM1-210ENST00000523339 TNNQ9UQP3 1299 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 TMX2Q9Y320 296 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 COL4A6Q14031 1691 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 BAHCC1Q9P281 2608 aa4.54□□□□□ -1.68
NPM1-210ENST00000523339 NCOR2Q9Y618 2525 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 ZNF236Q9UL36 1845 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 ATRXP46100 2492 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 ANKRD11Q6UB99 2663 aaPredicted RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 IL16Q14005 1332 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 MYH2Q9UKX2 1941 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 C9orf172C9J069 976 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 SRGAP3O43295 1099 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 KPNA6O60684 536 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 LILRB5O75023 590 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 PDGFBP01127 241 aaPredicted RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 H2AFB1P0C5Y9 115 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 H2AFB2P0C5Z0 115 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 EEF2P13639 858 aaKnown RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 ICAM3P32942 547 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 GUCY1A2P33402 732 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 PLCD1P51178 756 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 PURAQ00577 322 aaKnown RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 CNTN2Q02246 1040 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 PTPN11Q06124 597 aaPredicted RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 DLX2Q07687 328 aaPredicted RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 TBC1D8BQ0IIM8 1120 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 HYAL1Q12794 435 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 NFRKBQ6P4R8 1299 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 ADGRA1Q86SQ6 560 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 RBM23Q86U06 439 aaKnown RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 DHX37Q8IY37 1157 aaKnown RBP4.53□□□□□ -1.68
NPM1-210ENST00000523339 ALDH16A1Q8IZ83 802 aa4.53□□□□□ -1.68
NPM1-210ENST00000523339 C7orf31Q8N865 590 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms