RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 CCDC155Q8N6L0 562 aa7.35□□□□□ -1.23
SHPRH-210ENST00000523276 SMCR8Q8TEV9 937 aaPredicted RBP7.35□□□□□ -1.23
SHPRH-210ENST00000523276 CCDC42Q96M95 316 aa7.35□□□□□ -1.23
SHPRH-210ENST00000523276 PURBQ96QR8 312 aaKnown RBP7.35□□□□□ -1.23
SHPRH-210ENST00000523276 BHMT2Q9H2M3 363 aa7.35□□□□□ -1.23
SHPRH-210ENST00000523276 RGL1Q9NZL6 768 aa7.35□□□□□ -1.23
SHPRH-210ENST00000523276 ARHGAP20Q9P2F6 1191 aa7.35□□□□□ -1.23
SHPRH-210ENST00000523276 FAM184BQ9ULE4 1060 aa7.35□□□□□ -1.23
SHPRH-210ENST00000523276 TRAF3IP3Q9Y228 551 aa7.35□□□□□ -1.23
SHPRH-210ENST00000523276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.35□□□□□ -1.23
SHPRH-210ENST00000523276 SHTN1A0MZ66 631 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 PDXKO00764 312 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 ZNF263O14978 683 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 GAS7O60861 476 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 TBCAO75347 108 aaKnown RBP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 SLITRK3O94933 977 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 ZRANB2O95218 330 aaKnown RBP eCLIP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 ICAM1P05362 532 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 PLEKP08567 350 aaPredicted RBP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 MYBP10242 640 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 ZSCAN20P17040 1043 aaPredicted RBP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 GAP43P17677 238 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 INPP5BP32019 993 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 HOXD13P35453 343 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 EIF4A3P38919 411 aaKnown RBP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 HSD17B4P51659 736 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 TUBB4BP68371 445 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 UBXN2AP68543 259 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 ADAM9Q13443 819 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 CTTNQ14247 550 aaKnown RBP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 RASA3Q14644 834 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 SPA17Q15506 151 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 KNOP1Q1ED39 458 aaKnown RBP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 DALRD3Q5D0E6 543 aaKnown RBP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 RINT1Q6NUQ1 792 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 TRAPPC11Q7Z392 1133 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 JDP2Q8WYK2 163 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 DYDC2Q96IM9 177 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 TEPSINQ96N21 525 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 ZNF341Q9BYN7 854 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 WDR11Q9BZH6 1224 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 TSGA10Q9BZW7 698 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 LACRTQ9GZZ8 138 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 EPC1Q9H2F5 836 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 TAOK3Q9H2K8 898 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 CEP72Q9P209 647 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 PUF60Q9UHX1 559 aaKnown RBP7.34□□□□□ -1.23
SHPRH-210ENST00000523276 MYO6Q9UM54 1294 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 TFR2Q9UP52 801 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 KIF13BQ9NQT8 1826 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 ZNF536O15090 1300 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 RPTORQ8N122 1335 aa7.34□□□□□ -1.23
SHPRH-210ENST00000523276 POM121CA8CG34 1229 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 RSPH10B2B2RC85 870 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 WDR46O15213 610 aaKnown RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 CHMP2AO43633 222 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 CALUO43852 315 aaPredicted RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 NOL4O94818 638 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 PRPF6O94906 941 aaKnown RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 RSPH10BP0C881 870 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 ARP10275 920 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 NR2F2P24468 414 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 RPS12P25398 132 aaKnown RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 KIF11P52732 1056 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 CYP27A1Q02318 531 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 BMS1Q14692 1282 aaKnown RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 TNIP1Q15025 636 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 PAPD7Q5XG87 772 aaKnown RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 TMCO3Q6UWJ1 677 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 B3GNT9Q6UX72 402 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 SLC30A10Q6XR72 485 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 CACNA2D4Q7Z3S7 1137 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 KRT26Q7Z3Y9 468 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 FRMD5Q7Z6J6 570 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 TPH2Q8IWU9 490 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 LPAR1Q92633 364 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 SYN2Q92777 582 aaPredicted RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 AGBL1Q96MI9 1066 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 ZNF577Q9BSK1 485 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 LSM14BQ9BX40 385 aaKnown RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 PARD6BQ9BYG5 372 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 KIAA1683Q9H0B3 1180 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 NUCKS1Q9H1E3 243 aaKnown RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 UNC45AQ9H3U1 944 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 ZSWIM4Q9H7M6 989 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 OLFML3Q9NRN5 406 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 GINM1Q9NU53 330 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 TYW1Q9NV66 732 aaKnown RBP7.34□□□□□ -1.24
SHPRH-210ENST00000523276 CCPG1Q9ULG6 757 aa7.34□□□□□ -1.24
SHPRH-210ENST00000523276 ASTN1O14525 1302 aa7.33□□□□□ -1.24
SHPRH-210ENST00000523276 FRMPD4Q14CM0 1322 aa7.33□□□□□ -1.24
SHPRH-210ENST00000523276 SSU72P8A0A1W2PR75 194 aa7.33□□□□□ -1.24
SHPRH-210ENST00000523276 ANO9A1A5B4 782 aa7.33□□□□□ -1.24
SHPRH-210ENST00000523276 CTAGE15A4D2H0 777 aa7.33□□□□□ -1.24
SHPRH-210ENST00000523276 SPDYE5A6NIY4 337 aa7.33□□□□□ -1.24
SHPRH-210ENST00000523276 NFKBIEO00221 500 aa7.33□□□□□ -1.24
SHPRH-210ENST00000523276 SLC16A3O15427 465 aaKnown RBP7.33□□□□□ -1.24
SHPRH-210ENST00000523276 TFRCP02786 760 aaKnown RBP7.33□□□□□ -1.24
SHPRH-210ENST00000523276 ATP1A1P05023 1023 aaKnown RBP7.33□□□□□ -1.24
SHPRH-210ENST00000523276 CTAGE8P0CG41 777 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms