RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 SP4Q02446 784 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 ADAM15Q13444 863 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 SMAD4Q13485 552 aaKnown RBP10.74□□□□□ -0.69
SDC2-207ENST00000522911 BTG3Q14201 252 aaPredicted RBP10.74□□□□□ -0.69
SDC2-207ENST00000522911 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 HERC4Q5GLZ8 1057 aaPredicted RBP10.74□□□□□ -0.69
SDC2-207ENST00000522911 CREB3L3Q68CJ9 461 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 MCTP2Q6DN12 878 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 APOA5Q6Q788 366 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 RTN4RL1Q86UN2 441 aaPredicted RBP10.74□□□□□ -0.69
SDC2-207ENST00000522911 CRYGNQ8WXF5 182 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 MSLNLQ96KJ4 702 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 ESYT1Q9BSJ8 1104 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 CLDND1Q9NY35 253 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 PADI3Q9ULW8 664 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
SDC2-207ENST00000522911 TRPV2Q9Y5S1 764 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 CNTNAP5Q8WYK1 1306 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 COL1A2P08123 1366 aa10.74□□□□□ -0.69
SDC2-207ENST00000522911 M0QZ92 97 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 MBTPS2O43462 519 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 MARK3P27448 753 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 CD52P31358 61 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 SSTR3P32745 418 aaPredicted RBP10.73□□□□□ -0.69
SDC2-207ENST00000522911 STAT5BP51692 787 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 ACTR2P61160 394 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 EXOSC10Q01780 885 aaKnown RBP10.73□□□□□ -0.69
SDC2-207ENST00000522911 UBE3AQ05086 875 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 COL9A3Q14050 684 aaPredicted RBP10.73□□□□□ -0.69
SDC2-207ENST00000522911 UBE2SQ16763 222 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 ODR4Q5SWX8 454 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 RNF20Q5VTR2 975 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 WWC2Q6AWC2 1192 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 ABHD15Q6UXT9 468 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 CMTR1Q8N1G2 835 aaKnown RBP10.73□□□□□ -0.69
SDC2-207ENST00000522911 ZNF710Q8N1W2 664 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 SPPL3Q8TCT6 385 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 SDF4Q9BRK5 362 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 CELF4Q9BZC1 486 aaKnown RBP10.73□□□□□ -0.69
SDC2-207ENST00000522911 BARHL2Q9NY43 387 aa10.73□□□□□ -0.69
SDC2-207ENST00000522911 ESYT2A0FGR8 921 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 FAM86C2PA6NEL3 165 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 HBP1O60381 514 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 TBX10O75333 385 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 ITGB1P05556 798 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 CYP3A4P08684 503 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 SCG2P13521 617 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 IRS1P35568 1242 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 SARSP49591 514 aaKnown RBP10.72□□□□□ -0.69
SDC2-207ENST00000522911 COASYQ13057 564 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 ITGB3BPQ13352 177 aaPredicted RBP10.72□□□□□ -0.69
SDC2-207ENST00000522911 BMP2KLQ5H9B9 411 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 TYW1BQ6NUM6 668 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 SYNE3Q6ZMZ3 975 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 HEATR3Q7Z4Q2 680 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 BMP8AQ7Z5Y6 402 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 EFHBQ8N7U6 833 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 SMRP1Q8NCR6 262 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 ATP8B4Q8TF62 1192 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 AGO4Q9HCK5 861 aaKnown RBP10.72□□□□□ -0.69
SDC2-207ENST00000522911 MRPL42Q9Y6G3 142 aaKnown RBP10.72□□□□□ -0.69
SDC2-207ENST00000522911 MYO7AQ13402 2215 aa10.72□□□□□ -0.69
SDC2-207ENST00000522911 IGLV3-22A0A075B6J6 115 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 STXBP3O00186 592 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 DHX15O43143 795 aaKnown RBP10.71□□□□□ -0.69
SDC2-207ENST00000522911 ARP10275 920 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 RXRAP19793 462 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 NAPAP54920 295 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 KRT76Q01546 638 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 DLX2Q07687 328 aaPredicted RBP10.71□□□□□ -0.69
SDC2-207ENST00000522911 PAK2Q13177 524 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 NID2Q14112 1375 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 CBX2Q14781 532 aaPredicted RBP10.71□□□□□ -0.69
SDC2-207ENST00000522911 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 ATG2AQ2TAZ0 1938 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 ZNF484Q5JVG2 852 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 PDE12Q6L8Q7 609 aaKnown RBP10.71□□□□□ -0.69
SDC2-207ENST00000522911 MTHFD1LQ6UB35 978 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 MICU3Q86XE3 530 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 FBXL16Q8N461 479 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 CYP2W1Q8TAV3 490 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 CDCA3Q99618 268 aaPredicted RBP10.71□□□□□ -0.69
SDC2-207ENST00000522911 ANO3Q9BYT9 981 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 TMX1Q9H3N1 280 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 ELAC1Q9H777 363 aaKnown RBP10.71□□□□□ -0.69
SDC2-207ENST00000522911 RGS18Q9NS28 235 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 C1orf112Q9NSG2 853 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 CD207Q9UJ71 328 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
SDC2-207ENST00000522911 USP34Q70CQ2 3546 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 ZBTB42B2RXF5 422 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 C9IYK1 514 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 RBAK-RBAKDNI3L0D1 243 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 ZBTB43O43298 467 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 HMGB1P09429 215 aaKnown RBP10.7□□□□□ -0.7
SDC2-207ENST00000522911 DNAJB1P25685 340 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 ADCY7P51828 1080 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 IGBP1P78318 339 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms