RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 APBB2Q92870 758 aa10.46□□□□□ -0.73
TRAPPC9-212ENST00000521944 PPP2R3CQ969Q6 453 aa10.46□□□□□ -0.73
TRAPPC9-212ENST00000521944 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRAPPC9-212ENST00000521944 MTMR7Q9Y216 660 aa10.46□□□□□ -0.73
TRAPPC9-212ENST00000521944 SUPT16HQ9Y5B9 1047 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-212ENST00000521944 PLXNA4Q9HCM2 1894 aa10.46□□□□□ -0.74
TRAPPC9-212ENST00000521944 SORBS3O60504 671 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 PPFIA3O75145 1194 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 SMIM10L2AP0DMW4 78 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 SMIM10L2BP0DMW5 78 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 ATP5JP18859 108 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 ATXN1P54253 815 aaKnown RBP10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 ADAM17P78536 824 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 SP2Q02086 613 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 LAMC2Q13753 1193 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 MYSM1Q5VVJ2 828 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 ERC1Q8IUD2 1116 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 FLCNQ8NFG4 579 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 CYP2W1Q8TAV3 490 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 NEK1Q96PY6 1258 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 SEMA4AQ9H3S1 761 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 POMKQ9H5K3 350 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 BCAS3Q9H6U6 928 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 SLC27A5Q9Y2P5 690 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 FANCMQ8IYD8 2048 aa10.45□□□□□ -0.74
TRAPPC9-212ENST00000521944 C17orf102A2RUQ5 167 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 FSCN2O14926 492 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 IPO8O15397 1037 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 CAND2O75155 1236 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 GHRP10912 638 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 MS4A1P11836 297 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 TECP42680 631 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 GATMP50440 423 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 LPIN1Q14693 890 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 SUMF1Q8NBK3 374 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 RGS22Q8NE09 1264 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 FEZF2Q8TBJ5 459 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 SYTL5Q8TDW5 730 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 FRAT1Q92837 279 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 COL26A1Q96A83 441 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 LIMD1Q9UGP4 676 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 STX8Q9UNK0 236 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 MYH7P12883 1935 aa10.44□□□□□ -0.74
TRAPPC9-212ENST00000521944 FRMPD2Q68DX3 1309 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 RLBP1P12271 317 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 MGAT3Q09327 533 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 STXBP2Q15833 593 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 CCDC96Q2M329 555 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 CELF3Q5SZQ8 465 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 CMTR2Q8IYT2 770 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 DCAF4Q8WV16 495 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 SPIRE2Q8WWL2 714 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 RUBCNQ92622 972 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 MPHOSPH6Q99547 160 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 SPSB2Q99619 263 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 MFSD1Q9H3U5 465 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 ZNF287Q9HBT7 754 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 SETD4Q9NVD3 440 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 TELO2Q9Y4R8 837 aa10.43□□□□□ -0.74
TRAPPC9-212ENST00000521944 H3BRB1 525 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 M0R2C6 588 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 IFIT2P09913 472 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 PAN2Q504Q3 1202 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 IFNL3Q8IZI9 196 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 CLASRPQ8N2M8 674 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 RASGRP4Q8TDF6 673 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 MICAL1Q8TDZ2 1067 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 NSUN6Q8TEA1 469 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 IWS1Q96ST2 819 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 CDCA3Q99618 268 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 TUT1Q9H6E5 874 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 AGO3Q9H9G7 860 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 ERVK-5Q9HDB9 667 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 NR2E1Q9Y466 385 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 MRVI1Q9Y6F6 885 aa10.42□□□□□ -0.74
TRAPPC9-212ENST00000521944 WDR19Q8NEZ3 1342 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 IGF2RP11717 2491 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 DCDC2BA2VCK2 349 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 HIDE1A8MVS5 230 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 B4DLN1 442 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 PATL2C9JE40 543 aaKnown RBP10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 GPAA1O43292 621 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 EIF3JO75822 258 aaKnown RBP10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 WEE2P0C1S8 567 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 TDO2P48775 406 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 MRPL12P52815 198 aaKnown RBP10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 KANK3Q6NY19 840 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 LLGL2Q6P1M3 1020 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 RUFY4Q6ZNE9 571 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 ZDHHC14Q8IZN3 488 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 RIN2Q8WYP3 895 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 SPATA33Q96N06 139 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 RMDN3Q96TC7 470 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 BCL11AQ9H165 835 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 ADAM7Q9H2U9 754 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 CPVLQ9H3G5 476 aa10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.41□□□□□ -0.74
TRAPPC9-212ENST00000521944 FOXP2O15409 715 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms