RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 LMAN2LQ9H0V9 348 aa23.75■■□□□ 1.39
PABPC1-218ENST00000521865 PADI3Q9ULW8 664 aa23.75■■□□□ 1.39
PABPC1-218ENST00000521865 FAM50BQ9Y247 325 aa23.75■■□□□ 1.39
PABPC1-218ENST00000521865 GINS2Q9Y248 185 aa23.75■■□□□ 1.39
PABPC1-218ENST00000521865 HCN4Q9Y3Q4 1203 aa23.75■■□□□ 1.39
PABPC1-218ENST00000521865 SQORQ9Y6N5 450 aa23.75■■□□□ 1.39
PABPC1-218ENST00000521865 MEIS1O00470 390 aa23.74■■□□□ 1.39
PABPC1-218ENST00000521865 GRM6O15303 877 aa23.74■■□□□ 1.39
PABPC1-218ENST00000521865 CDC45O75419 566 aa23.74■■□□□ 1.39
PABPC1-218ENST00000521865 DGKIO75912 1065 aa23.74■■□□□ 1.39
PABPC1-218ENST00000521865 SLC26A2P50443 739 aa23.74■■□□□ 1.39
PABPC1-218ENST00000521865 JAKMIP3Q5VZ66 844 aa23.74■■□□□ 1.39
PABPC1-218ENST00000521865 FAM160B1Q5W0V3 765 aa23.74■■□□□ 1.39
PABPC1-218ENST00000521865 LINC01599Q8WXQ3 324 aa23.74■■□□□ 1.39
PABPC1-218ENST00000521865 ZNF689Q96CS4 500 aaPredicted RBP23.74■■□□□ 1.39
PABPC1-218ENST00000521865 CELF4Q9BZC1 486 aaKnown RBP23.74■■□□□ 1.39
PABPC1-218ENST00000521865 RC3H2Q9HBD1 1191 aaKnown RBP23.74■■□□□ 1.39
PABPC1-218ENST00000521865 SMIM35A0A1B0GVV1 85 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 NCK2O43639 380 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 HMGB1P09429 215 aaKnown RBP23.73■■□□□ 1.39
PABPC1-218ENST00000521865 STAG3L1P0CL83 205 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 CDC27P30260 824 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 METAP2P50579 478 aaKnown RBP eCLIP23.73■■□□□ 1.396e-37■■■□□ 16.7
PABPC1-218ENST00000521865 KRT76Q01546 638 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 TSGA10IPQ3SY00 556 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 MTHFD1LQ6UB35 978 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 PLA2G4DQ86XP0 818 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 NPAS4Q8IUM7 802 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 CLP1Q92989 425 aaKnown RBP23.73■■□□□ 1.39
PABPC1-218ENST00000521865 LRFN2Q9ULH4 789 aa23.73■■□□□ 1.39
PABPC1-218ENST00000521865 PI4K2BG5E9Z4 385 aa23.72■■□□□ 1.39
PABPC1-218ENST00000521865 LINC00271P0C7V0 271 aa23.72■■□□□ 1.39
PABPC1-218ENST00000521865 PLA2G5P39877 138 aa23.72■■□□□ 1.39
PABPC1-218ENST00000521865 PAN2Q504Q3 1202 aaKnown RBP23.72■■□□□ 1.39
PABPC1-218ENST00000521865 RTN4RL1Q86UN2 441 aaPredicted RBP23.72■■□□□ 1.39
PABPC1-218ENST00000521865 NME8Q8N427 588 aa23.72■■□□□ 1.39
PABPC1-218ENST00000521865 UIMC1Q96RL1 719 aa23.72■■□□□ 1.39
PABPC1-218ENST00000521865 PLVAPQ9BX97 442 aa23.72■■□□□ 1.39
PABPC1-218ENST00000521865 IGFLR1Q9H665 355 aa23.72■■□□□ 1.39
PABPC1-218ENST00000521865 ALG13Q9NP73 1137 aaKnown RBP23.72■■□□□ 1.39
PABPC1-218ENST00000521865 IGSF9BQ9UPX0 1349 aa23.72■■□□□ 1.39
PABPC1-218ENST00000521865 CCDC196A0A1B0GTZ2 297 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 HBP1O60381 514 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 GPR37L1O60883 481 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 ATG7O95352 703 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 CCNE2O96020 404 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 SCG2P13521 617 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 KLRC1P26715 233 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 ADD1P35611 737 aaKnown RBP23.71■■□□□ 1.39
PABPC1-218ENST00000521865 CLK2P49760 499 aaKnown RBP23.71■■□□□ 1.39
PABPC1-218ENST00000521865 NFX1Q12986 1120 aaKnown RBP23.71■■□□□ 1.39
PABPC1-218ENST00000521865 MIS18BP1Q6P0N0 1132 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 NIPA1Q7RTP0 329 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 CKAP2LQ8IYA6 745 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 CMTR2Q8IYT2 770 aaKnown RBP23.71■■□□□ 1.39
PABPC1-218ENST00000521865 ATP8B4Q8TF62 1192 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 ZNF302Q9NR11 478 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 FAM217BQ9NTX9 383 aaPredicted RBP23.71■■□□□ 1.39
PABPC1-218ENST00000521865 TCEAL9Q9UHQ7 104 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 MRPL42Q9Y6G3 142 aaKnown RBP23.71■■□□□ 1.39
PABPC1-218ENST00000521865 BRWD1Q9NSI6 2320 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 KAT6AQ92794 2004 aa23.71■■□□□ 1.39
PABPC1-218ENST00000521865 FAM86B1E9PN63 330 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 FAM86B2P0C5J1 330 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 CPA1P15085 419 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 RCAN1P53805 252 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 APOBRQ0VD83 1088 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 HYAL1Q12794 435 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 CLUL1Q15846 466 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 PFKFB3Q16875 520 aaPredicted RBP23.7■■□□□ 1.38
PABPC1-218ENST00000521865 TMEM266Q2M3C6 531 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 PDXDC2PQ6P474 469 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 ABHD15Q6UXT9 468 aa23.7■■□□□ 1.38
PABPC1-218ENST00000521865 IPO5O00410 1097 aaKnown RBP23.69■■□□□ 1.38
PABPC1-218ENST00000521865 MMP1P03956 469 aa23.69■■□□□ 1.38
PABPC1-218ENST00000521865 SWSAP1Q6NVH7 229 aa23.69■■□□□ 1.38
PABPC1-218ENST00000521865 CCDC60Q8IWA6 550 aaPredicted RBP23.69■■□□□ 1.38
PABPC1-218ENST00000521865 CCDC12Q8WUD4 166 aaPredicted RBP23.69■■□□□ 1.38
PABPC1-218ENST00000521865 ZNF577Q9BSK1 485 aa23.69■■□□□ 1.38
PABPC1-218ENST00000521865 C6orf50Q9HD87 102 aa23.69■■□□□ 1.38
PABPC1-218ENST00000521865 C11orf16Q9NQ32 467 aa23.69■■□□□ 1.38
PABPC1-218ENST00000521865 PLAGL2Q9UPG8 496 aa23.69■■□□□ 1.38
PABPC1-218ENST00000521865 KDM3AQ9Y4C1 1321 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 IGKV6D-21A0A0A0MT36 114 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 RPS6KA5O75582 802 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 ALADP13716 330 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 COL19A1Q14993 1142 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 Q6ZUG5 572 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 TRMT1LQ7Z2T5 733 aaKnown RBP23.68■■□□□ 1.38
PABPC1-218ENST00000521865 BRF1Q92994 677 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 P2RX5Q93086 422 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 PPP2R3CQ969Q6 453 aa23.68■■□□□ 1.38
PABPC1-218ENST00000521865 JAKMIP1Q96N16 626 aaKnown RBP23.68■■□□□ 1.38
PABPC1-218ENST00000521865 DENND3A2RUS2 1198 aa23.67■■□□□ 1.38
PABPC1-218ENST00000521865 AKAP17AQ02040 695 aaKnown RBP23.67■■□□□ 1.38
PABPC1-218ENST00000521865 ZNF484Q5JVG2 852 aa23.67■■□□□ 1.38
PABPC1-218ENST00000521865 MCTP2Q6DN12 878 aa23.67■■□□□ 1.38
PABPC1-218ENST00000521865 REXO1Q8N1G1 1221 aaKnown RBP23.67■■□□□ 1.38
PABPC1-218ENST00000521865 PPP1R16BQ96T49 567 aa23.67■■□□□ 1.38
PABPC1-218ENST00000521865 TMX1Q9H3N1 280 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms