RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 HSPBP1Q9NZL4 362 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 SLAMF8Q9P0V8 285 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZNF652Q9Y2D9 606 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 SIT1Q9Y3P8 196 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 LOC102724159A0A0B4J2E5 919 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 GOLGA8AA7E2F4 631 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 GOLGA8BA8MQT2 603 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 GOLGA6L22H0YM25 854 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 PEX14O75381 377 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 PF4V1P10720 104 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 PRKCAP17252 672 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 AGXTP21549 392 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 TACR1P25103 407 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 MANFP55145 182 aaKnown RBP4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 DUSP4Q13115 394 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 IKZF1Q13422 519 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 GTF2H3Q13889 308 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 GBX1Q14549 363 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 PWP2Q15269 919 aaKnown RBP4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 FSCN1Q16658 493 aaKnown RBP4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 PGM2L1Q6PCE3 622 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 FRMD7Q6ZUT3 714 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 KANSL1Q7Z3B3 1105 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 PROSER1Q86XN7 944 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 CERS3Q8IU89 383 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 ARRDC4Q8NCT1 418 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 TTLL11Q8NHH1 800 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 PHOSPHO1Q8TCT1 267 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 USP33Q8TEY7 942 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 RUNDC1Q96C34 613 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 TEKT5Q96M29 485 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 AIFM3Q96NN9 605 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 NUP88Q99567 741 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 WASF3Q9UPY6 502 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 GIT1Q9Y2X7 761 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 ATP23Q9Y6H3 246 aa4.58□□□□□ -1.68
HMGN1P28-201ENST00000521340 SRGAP3O43295 1099 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 TPD52L2O43399 206 aaKnown RBP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 CAND2O75155 1236 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 CFBP00751 764 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 APPP05067 770 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 ASGR2P07307 311 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 ATF3P18847 181 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 TRHRP34981 398 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 HERVK_113P62684 666 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 CHRNEQ04844 493 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 MESP2Q0VG99 397 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 ZNF174Q15697 407 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 ZBTB41Q5SVQ8 909 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 SLC23A3Q6PIS1 610 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 CXorf67Q86X51 503 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 NETO2Q8NC67 525 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 ASB15Q8WXK1 588 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 ZNF700Q9H0M5 742 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 USP36Q9P275 1121 aaKnown RBP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 MYOTQ9UBF9 498 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 DDX20Q9UHI6 824 aaKnown RBP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 TUBD1Q9UJT1 453 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 PALD1Q9ULE6 856 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 COA3Q9Y2R0 106 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 PTPN22Q9Y2R2 807 aa4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 NOC2LQ9Y3T9 749 aaKnown RBP4.57□□□□□ -1.68
HMGN1P28-201ENST00000521340 WASHC2AQ641Q2 1341 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 PRSS38A1L453 326 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 KLHL33A6NCF5 533 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 VSTM5A8MXK1 200 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 KRIT1O00522 736 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 KDM1AO60341 852 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 FARP2O94887 1054 aaPredicted RBP4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 DBHP09172 617 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 TRIM27P14373 513 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 PNLIPP16233 465 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 C5AR1P21730 350 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 ENPP1P22413 925 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 CD40P25942 277 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 CYP2C19P33261 490 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 GJA4P35212 333 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 GDNFP39905 211 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 HK2P52789 917 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 ERVFRD-1P60508 538 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 RBM10P98175 930 aaKnown RBP4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 GRM3Q14832 879 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 MYBPC3Q14896 1274 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 GFOD2Q3B7J2 385 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 PITRM1Q5JRX3 1037 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 RRP12Q5JTH9 1297 aaKnown RBP4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 BTBD8Q5XKL5 378 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 UNQ6494/PRO21346Q6UXR6 183 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 CILP2Q8IUL8 1156 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 ZZZ3Q8IYH5 903 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 PRR18Q8N4B5 295 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 FLAD1Q8NFF5 587 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 NUP43Q8NFH3 380 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 SVIPQ8NHG7 77 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 SLC35G2Q8TBE7 412 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 TGFBRAP1Q8WUH2 860 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 SEC14L1Q92503 715 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms