RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SCARA3Q6AZY7 606 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 TTLL5Q6EMB2 1281 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 NXPE4Q6UWF7 544 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 THAP5Q7Z6K1 395 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 ZSCAN29Q8IWY8 852 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-208ENST00000521037 MFSD4AQ8N468 514 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 KCT2Q8NC54 265 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 USP6NLQ92738 828 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 BADQ92934 168 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 RBCK1Q9BYM8 510 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 PPP4R2Q9NY27 417 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 DCTN4Q9UJW0 460 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 AKAP2Q9Y2D5 859 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 ATRNL1Q5VV63 1379 aa5.01□□□□□ -1.61
VPS13B-208ENST00000521037 FRMPD3Q5JV73 1810 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 ZZEF1O43149 2961 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 RLFQ13129 1914 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 DNAJC25-GNG10A0A024R161 153 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 H3BS24 57 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 IRS4O14654 1257 aaPredicted RBP5□□□□□ -1.61
VPS13B-208ENST00000521037 HTATSF1O43719 755 aaKnown RBP5□□□□□ -1.61
VPS13B-208ENST00000521037 HPXP02790 462 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 HMGCRP04035 888 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 CCT4P50991 539 aaKnown RBP5□□□□□ -1.61
VPS13B-208ENST00000521037 PTPN11Q06124 597 aaPredicted RBP5□□□□□ -1.61
VPS13B-208ENST00000521037 PPATQ06203 517 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 INPP5AQ14642 412 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 NKG7Q16617 165 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 SFRP5Q5T4F7 317 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 C16orf59Q7L2K0 433 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 ZBTB38Q8NAP3 1195 aaPredicted RBP5□□□□□ -1.61
VPS13B-208ENST00000521037 ABHD4Q8TB40 342 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 UBXN4Q92575 508 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 DMRTB1Q96MA1 342 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 EPB41L4BQ9H329 900 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 PRDM12Q9H4Q4 367 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 TDRD3Q9H7E2 651 aaKnown RBP5□□□□□ -1.61
VPS13B-208ENST00000521037 CD209Q9NNX6 404 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 LRRC37A2A6NM11 1700 aa5□□□□□ -1.61
VPS13B-208ENST00000521037 SETXQ7Z333 2677 aaKnown RBP4.99□□□□□ -1.61
VPS13B-208ENST00000521037 PEX10O60683 326 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 IL1R1P14778 569 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 MAPK1P28482 360 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 CCND3P30281 292 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-208ENST00000521037 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 FGD1P98174 961 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 CACNB2Q08289 660 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-208ENST00000521037 DSC3Q14574 896 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 CCDC85BQ15834 202 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-208ENST00000521037 KRT24Q2M2I5 525 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 C15orf52Q6ZUT6 534 aaKnown RBP4.99□□□□□ -1.61
VPS13B-208ENST00000521037 TTC6Q86TZ1 520 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 ZNF507Q8TCN5 953 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 PPM1EQ8WY54 764 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 JARID2Q92833 1246 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-208ENST00000521037 KCNN1Q92952 543 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 UBE2FQ969M7 185 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 CCDC120Q96HB5 630 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 VEZTQ9HBM0 779 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 CBX8Q9HC52 389 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 PDLIM7Q9NR12 457 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 ZNF292O60281 2723 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 ZFHX2Q9C0A1 2572 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-208ENST00000521037 A0A1B0GUL6 1792 aa4.99□□□□□ -1.61
VPS13B-208ENST00000521037 PKD1L2Q7Z442 2459 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 PHIPQ8WWQ0 1821 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 A0A0G2JLL6 359 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-208ENST00000521037 GRXCR1A8MXD5 290 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 ERC2O15083 957 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 CACNB3P54284 484 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 RTP1P59025 263 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 FKBP1AP62942 108 aaKnown RBP4.98□□□□□ -1.61
VPS13B-208ENST00000521037 TNK2Q07912 1038 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS13B-208ENST00000521037 HSP90AB3PQ58FF7 597 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 NOL9Q5SY16 702 aaKnown RBP4.98□□□□□ -1.61
VPS13B-208ENST00000521037 LRFN4Q6PJG9 635 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 PRRT2Q7Z6L0 340 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-208ENST00000521037 PRSS33Q8NF86 280 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 RELTQ969Z4 430 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 VWCEQ96DN2 955 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 WRNIP1Q96S55 665 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 PARD6AQ9NPB6 346 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 PCDHA4Q9UN74 947 aa4.98□□□□□ -1.61
VPS13B-208ENST00000521037 RPAP1Q9BWH6 1393 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-208ENST00000521037 MYOCOSA0A1B0GUC4 107 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 TCAF2A6NFQ2 919 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 WASH4PA8MWX3 477 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 TCP10L2B9ZVM9 353 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 F8W031 263 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-208ENST00000521037 TNPO2O14787 897 aaKnown RBP4.97□□□□□ -1.61
VPS13B-208ENST00000521037 POU3F3P20264 500 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-208ENST00000521037 AIMP1Q12904 312 aaKnown RBP4.97□□□□□ -1.61
VPS13B-208ENST00000521037 CCL14Q16627 93 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 GAB4Q2WGN9 574 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 NAALADL2Q58DX5 795 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 LLGL2Q6P1M3 1020 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 MFSD2AQ8NA29 543 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 TRPV1Q8NER1 839 aa4.97□□□□□ -1.61
VPS13B-208ENST00000521037 TTLL11Q8NHH1 800 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms