RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 STAT5BP51692 787 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 ADGRD2Q7Z7M1 963 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 TMTC2Q8N394 836 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 NME8Q8N427 588 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 FBXL6Q8N531 539 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 SMRP1Q8NCR6 262 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 MSLNLQ96KJ4 702 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 RC3H2Q9HBD1 1191 aaKnown RBP13.16□□□□□ -0.3
MRPS28-206ENST00000520946 JADE2Q9NQC1 790 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 TLR9Q9NR96 1032 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 PUF60Q9UHX1 559 aaKnown RBP13.16□□□□□ -0.3
MRPS28-206ENST00000520946 DOCK5Q9H7D0 1870 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 BACH1O14867 736 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 PER2O15055 1255 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 ST18O60284 1047 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 IGHDP01880 384 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 CALM1P0DP23 149 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 CALM2P0DP24 149 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 CALM3P0DP25 149 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 ITGB5P18084 799 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 DNAJB1P25685 340 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 ZNF76P36508 570 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 UBE3AQ05086 875 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 SIGLEC14Q08ET2 396 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 TMEM266Q2M3C6 531 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 MARCH8Q5T0T0 291 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 SYNE3Q6ZMZ3 975 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
MRPS28-206ENST00000520946 ZBTB10Q96DT7 871 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 MAP3K14Q99558 947 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 CDCA3Q99618 268 aaPredicted RBP13.15□□□□□ -0.3
MRPS28-206ENST00000520946 TMEM260Q9NX78 707 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 PCDHA2Q9Y5H9 948 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 TTC3P53804 2025 aa13.15□□□□□ -0.3
MRPS28-206ENST00000520946 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 LOC730098B7Z3J9 87 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 RPS6KA5O75582 802 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 CA8P35219 290 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 SARSP49591 514 aaKnown RBP13.14□□□□□ -0.31
MRPS28-206ENST00000520946 PTH1RQ03431 593 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 CAMK1Q14012 370 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 UBE2SQ16763 222 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 IER5LQ5T953 404 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 FAM160B1Q5W0V3 765 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 PDE12Q6L8Q7 609 aaKnown RBP13.14□□□□□ -0.31
MRPS28-206ENST00000520946 RTN4RL1Q86UN2 441 aaPredicted RBP13.14□□□□□ -0.31
MRPS28-206ENST00000520946 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 PRSS33Q8NF86 280 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 IGDCC4Q8TDY8 1250 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 TRAPPC12Q8WVT3 735 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 LINC01599Q8WXQ3 324 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 C1orf112Q9NSG2 853 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
MRPS28-206ENST00000520946 IGSF9BQ9UPX0 1349 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 GPR182O15218 404 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 PRC1O43663 620 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 FGF18O76093 207 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 MCM5P33992 734 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 TECP42680 631 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 GATMP50440 423 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 ACTR2P61160 394 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 BMS1Q14692 1282 aaKnown RBP13.13□□□□□ -0.31
MRPS28-206ENST00000520946 PLCB4Q15147 1175 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 TTC22Q5TAA0 569 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 MTHFD1LQ6UB35 978 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
MRPS28-206ENST00000520946 PLPPR4Q7Z2D5 763 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 CKAP2LQ8IYA6 745 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 ABI1Q8IZP0 508 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 CMTR1Q8N1G2 835 aaKnown RBP13.13□□□□□ -0.31
MRPS28-206ENST00000520946 PHOX2BQ99453 314 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 ADAM2Q99965 735 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 IL25Q9H293 177 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 ENTPD7Q9NQZ7 604 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 KCNH7Q9NS40 1196 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 PCDHGC5Q9Y5F6 944 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 SLC12A7Q9Y666 1083 aa13.13□□□□□ -0.31
MRPS28-206ENST00000520946 hCG_1642624A0A1W2PR95 340 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 GFRA3O60609 400 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
MRPS28-206ENST00000520946 LAG3P18627 525 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 RXRAP19793 462 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 SP100P23497 879 aaPredicted RBP13.12□□□□□ -0.31
MRPS28-206ENST00000520946 KLRC1P26715 233 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 SLC26A2P50443 739 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 KRT17Q04695 432 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 PLPP4Q5VZY2 271 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 LLGL2Q6P1M3 1020 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 SLC24A5Q71RS6 500 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 SRBD1Q8N5C6 995 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms