RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 GCNT4Q9P109 453 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 STK24Q9Y6E0 443 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 GOLGA8IPA6NC78 632 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 GOLGA8JA6NMD2 632 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 PNMA6AP0CW24 399 aaPredicted RBP12.46□□□□□ -0.41
CLK4-206ENST00000520878 SPATA31C1P0DKV0 1188 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 HERVK_113P62684 666 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 SEMA3FQ13275 785 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 BAATQ14032 418 aaPredicted RBP12.46□□□□□ -0.41
CLK4-206ENST00000520878 SNRNP48Q6IEG0 339 aaKnown RBP12.46□□□□□ -0.41
CLK4-206ENST00000520878 GOLGA6L1Q8N7Z2 621 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 RABGGTAQ92696 567 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 NOX5Q96PH1 765 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 PAGR1Q9BTK6 254 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 TSGA10Q9BZW7 698 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 ST7Q9NRC1 585 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 RNF146Q9NTX7 359 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 NCK2O43639 380 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 LRRN2O75325 713 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 ABCB4P21439 1286 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 SLC12A3P55017 1021 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 CETN1Q12798 172 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 Q4G0T1 1027 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 EEPD1Q7L9B9 569 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 GBP3Q9H0R5 595 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 ARHGAP20Q9P2F6 1191 aa12.46□□□□□ -0.42
CLK4-206ENST00000520878 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.42
CLK4-206ENST00000520878 SLITRK3O94933 977 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 FTCDO95954 541 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 OTOP1Q7RTM1 612 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 CEP63Q96MT8 703 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 ZBTB22O15209 634 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 NPM3O75607 178 aaKnown RBP12.45□□□□□ -0.42
CLK4-206ENST00000520878 GFPT2O94808 682 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 HARSP12081 509 aaKnown RBP12.45□□□□□ -0.42
CLK4-206ENST00000520878 PEX3P56589 373 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 CKAP4Q07065 602 aaKnown RBP12.45□□□□□ -0.42
CLK4-206ENST00000520878 WHAMMP3Q1A5X7 153 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 IQCEQ6IPM2 695 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 LRRC55Q6ZSA7 311 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 TRIM58Q8NG06 486 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 SLC16A10Q8TF71 515 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 U2AF1L4Q8WU68 220 aaKnown RBP12.45□□□□□ -0.42
CLK4-206ENST00000520878 NAV1Q8NEY1 1877 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 EIF3CLB5ME19 914 aaKnown RBP12.45□□□□□ -0.42
CLK4-206ENST00000520878 EHHADHQ08426 723 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 GJB7Q6PEY0 223 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 FAM83AQ86UY5 434 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 IL31RAQ8NI17 732 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 EIF3CQ99613 913 aaKnown RBP12.45□□□□□ -0.42
CLK4-206ENST00000520878 FAM184BQ9ULE4 1060 aa12.45□□□□□ -0.42
CLK4-206ENST00000520878 RCCD1A6NED2 376 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 HIP1RO75146 1068 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 GAP43P17677 238 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 PSMC2P35998 433 aaKnown RBP12.44□□□□□ -0.42
CLK4-206ENST00000520878 ARHGAP25P42331 645 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 NPEPPSP55786 919 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 COG2Q14746 738 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 MUM1L1Q5H9M0 696 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 ANKRD35Q8N283 1001 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 NOA1Q8NC60 698 aaKnown RBP12.44□□□□□ -0.42
CLK4-206ENST00000520878 MXRA8Q9BRK3 442 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 SMARCAL1Q9NZC9 954 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 MYO1AQ9UBC5 1043 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 DDX41Q9UJV9 622 aaKnown RBP12.44□□□□□ -0.42
CLK4-206ENST00000520878 PLAGL2Q9UPG8 496 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 REXO2Q9Y3B8 237 aaKnown RBP12.44□□□□□ -0.42
CLK4-206ENST00000520878 CYP3A7-CYP3A51PA0A087WV96 503 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 AKAP3O75969 853 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 CYP3A7P24462 503 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 C2orf54Q08AI8 447 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 MOXD1Q6UVY6 613 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 AS3MTQ9HBK9 375 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 METTL14Q9HCE5 456 aaKnown RBP12.44□□□□□ -0.42
CLK4-206ENST00000520878 TYW1Q9NV66 732 aaKnown RBP12.44□□□□□ -0.42
CLK4-206ENST00000520878 PACSIN2Q9UNF0 486 aaPredicted RBP12.44□□□□□ -0.42
CLK4-206ENST00000520878 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 OPLAHO14841 1288 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 WDR46O15213 610 aaKnown RBP12.44□□□□□ -0.42
CLK4-206ENST00000520878 EPHA7Q15375 998 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 PLA2G4FQ68DD2 849 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 BTNL9Q6UXG8 535 aa12.44□□□□□ -0.42
CLK4-206ENST00000520878 TMEM110-MUSTN1A8MSY1 372 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 SLC16A4O15374 487 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 ICAM1P05362 532 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 VCAM1P19320 739 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 LENG9Q96B70 501 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 GPRC5CQ9NQ84 441 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 GGA3Q9NZ52 723 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 CEP72Q9P209 647 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 LONRF2Q1L5Z9 754 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 NFRKBQ6P4R8 1299 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 SEPT14Q6ZU15 432 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 CEP170P1Q96L14 293 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 CEP89Q96ST8 783 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 MMS19Q96T76 1030 aa12.43□□□□□ -0.42
CLK4-206ENST00000520878 ZCCHC17Q9NP64 241 aaKnown RBP12.43□□□□□ -0.42
CLK4-206ENST00000520878 PITPNM2Q9BZ72 1349 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms