RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	CNR2	P34972	360 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	UBXN11	Q5T124	520 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	FERMT3	Q86UX7	667 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	NIM1K	Q8IY84	436 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	LGI4	Q8N135	537 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	KLHL36	Q8N4N3	616 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	NUDT10	Q8NFP7	164 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	ASB15	Q8WXK1	588 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	RELT	Q969Z4	430 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	NUDT11	Q96G61	164 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	BARX1	Q9HBU1	254 aa	Predicted RBP	7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	GALNT8	Q9NY28	637 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	PLAA	Q9Y263	795 aa		7.16	□□□□□ -1.26
MSR1-211	ENST00000520846	KRTAP4-8	A0A0G2JLE6	195 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	RASSF10	A6NK89	507 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	CBX4	O00257	560 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	ENPP3	O14638	875 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	LRRTM3	Q86VH5	581 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	HIPK4	Q8NE63	616 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	MBD6	Q96DN6	1003 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	GBP4	Q96PP9	640 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	UCKL1	Q9NWZ5	548 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	B4GALT6	Q9UBX8	382 aa		7.15	□□□□□ -1.26
MSR1-211	ENST00000520846	TLDC2	A0PJX2	215 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	MPIG6B	O95866	241 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	NEK4	P51957	841 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	NFATC3	Q12968	1075 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	DALRD3	Q5D0E6	543 aa	Known RBP	7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	CATSPERE	Q5SY80	951 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	CC2D1A	Q6P1N0	951 aa	Predicted RBP	7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	CNNM4	Q6P4Q7	775 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846		Q6ZUG5	572 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	DHX37	Q8IY37	1157 aa	Known RBP	7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	CXorf38	Q8TB03	319 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	INVS	Q9Y283	1065 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	ZDHHC9	Q9Y397	364 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	ASB1	Q9Y576	335 aa		7.14	□□□□□ -1.27
MSR1-211	ENST00000520846	PRAMEF22	A3QJZ6	481 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846		H7C1D1	291 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	B4GALT3	O60512	393 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	FOXD2	O60548	495 aa	Predicted RBP	7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	KPNA6	O60684	536 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	POU3F2	P20265	443 aa	Predicted RBP	7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	ECE1	P42892	770 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	KIF11	P52732	1056 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	WDR72	Q3MJ13	1102 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	ERICH6B	Q5W0A0	696 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	GIMAP6	Q6P9H5	292 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	WDR48	Q8TAF3	677 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	ORAI3	Q9BRQ5	295 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	BTBD2	Q9BX70	525 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	AMN	Q9BXJ7	453 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	ADAM29	Q9UKF5	820 aa		7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	TMA7	Q9Y2S6	64 aa	Known RBP	7.13	□□□□□ -1.27
MSR1-211	ENST00000520846	GOLGA6L22	H0YM25	854 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	IL13RA1	P78552	427 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	STIL	Q15468	1287 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	PLEKHG4	Q58EX7	1191 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	LRSAM1	Q6UWE0	723 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	CXXC5	Q7LFL8	322 aa	Known RBP	7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	KIF18B	Q86Y91	864 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	KBTBD2	Q8IY47	623 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	ERCC4	Q92889	916 aa	Predicted RBP	7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	MFSD3	Q96ES6	412 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	PCIF1	Q9H4Z3	704 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	ACSS2	Q9NR19	701 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	ZKSCAN5	Q9Y2L8	839 aa		7.12	□□□□□ -1.27
MSR1-211	ENST00000520846	FAM83G	A6ND36	823 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	DVL2	O14641	736 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	SYN1	P17600	705 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	POLD1	P28340	1107 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	FNTB	P49356	437 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	ZNF174	Q15697	407 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	PLEKHH3	Q7Z736	793 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	REXO1L1P	Q8IX06	675 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	PPM1K	Q8N3J5	372 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	KIAA1958	Q8N8K9	716 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	AJUBA	Q96IF1	538 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	TARS2	Q9BW92	718 aa	Known RBP	7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	MTFR1L	Q9H019	292 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	KATNBL1	Q9H079	304 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	OR10A5	Q9H207	317 aa		7.11	□□□□□ -1.27
MSR1-211	ENST00000520846	CUTA	O60888	179 aa		7.1	□□□□□ -1.27
MSR1-211	ENST00000520846	CYP17A1	P05093	508 aa		7.1	□□□□□ -1.27
MSR1-211	ENST00000520846	TAF7L	Q5H9L4	462 aa		7.1	□□□□□ -1.27
MSR1-211	ENST00000520846	CALML6	Q8TD86	181 aa		7.1	□□□□□ -1.27
MSR1-211	ENST00000520846	BDH2	Q9BUT1	245 aa		7.1	□□□□□ -1.27
MSR1-211	ENST00000520846	IFT57	Q9NWB7	429 aa		7.1	□□□□□ -1.27
MSR1-211	ENST00000520846	FBXO10	Q9UK96	956 aa		7.1	□□□□□ -1.27
MSR1-211	ENST00000520846	KRTAP9-7	A8MTY7	169 aa		7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	B4GALT4	O60513	344 aa		7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	GAS7	O60861	476 aa		7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	F2	P00734	622 aa		7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	ATP2A2	P16615	1042 aa	Known RBP	7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	CSF2RB	P32927	897 aa		7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	TOP3A	Q13472	1001 aa	Predicted RBP	7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	SURF1	Q15526	300 aa		7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	7.09	□□□□□ -1.27
MSR1-211	ENST00000520846	KANK2	Q63ZY3	851 aa		7.09	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms