RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 PLA2G4DQ86XP0 818 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 FBXL16Q8N461 479 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 BANK1Q8NDB2 785 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 LINC01599Q8WXQ3 324 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 ZMYND12Q9H0C1 365 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 BDP1A6H8Y1 2624 aa22.36■■□□□ 1.17
PABPC1-215ENST00000520804 TTC3P53804 2025 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 SMIM35A0A1B0GVV1 85 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 C5orf67F2Z3F1 127 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 ADAMTS3O15072 1205 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 PRPF3O43395 683 aaKnown RBP22.35■■□□□ 1.17
PABPC1-215ENST00000520804 LINC00271P0C7V0 271 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 COL9A1P20849 921 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 KCNA5P22460 613 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 CTNNB1P35222 781 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 PKN1Q16512 942 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 LEXMQ3ZCV2 418 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 FAM160B1Q5W0V3 765 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 MCTP2Q6DN12 878 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 MTHFD1LQ6UB35 978 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 NME8Q8N427 588 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 CCDC12Q8WUD4 166 aaPredicted RBP22.35■■□□□ 1.17
PABPC1-215ENST00000520804 ZNF689Q96CS4 500 aaPredicted RBP22.35■■□□□ 1.17
PABPC1-215ENST00000520804 FTHL17Q9BXU8 183 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 CELF4Q9BZC1 486 aaKnown RBP22.35■■□□□ 1.17
PABPC1-215ENST00000520804 C6orf50Q9HD87 102 aa22.35■■□□□ 1.17
PABPC1-215ENST00000520804 IGSF9BQ9UPX0 1349 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 BRWD1Q9NSI6 2320 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 BACH1O14867 736 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 DHX15O43143 795 aaKnown RBP22.34■■□□□ 1.17
PABPC1-215ENST00000520804 HBP1O60381 514 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 DGKIO75912 1065 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 RB1P06400 928 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 RPS6KB1P23443 525 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 RTN4RL1Q86UN2 441 aaPredicted RBP22.34■■□□□ 1.17
PABPC1-215ENST00000520804 CCDC60Q8IWA6 550 aaPredicted RBP22.34■■□□□ 1.17
PABPC1-215ENST00000520804 REXO1Q8N1G1 1221 aaKnown RBP22.34■■□□□ 1.17
PABPC1-215ENST00000520804 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.34■■□□□ 1.17
PABPC1-215ENST00000520804 ATP8B4Q8TF62 1192 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 AGXT2Q9BYV1 514 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 PADI3Q9ULW8 664 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 RWDD3Q9Y3V2 267 aa22.34■■□□□ 1.17
PABPC1-215ENST00000520804 KDM3AQ9Y4C1 1321 aa22.33■■□□□ 1.17
PABPC1-215ENST00000520804 IPO5O00410 1097 aaKnown RBP22.33■■□□□ 1.17
PABPC1-215ENST00000520804 KLRC1P26715 233 aa22.33■■□□□ 1.17
PABPC1-215ENST00000520804 BMPR1AP36894 532 aa22.33■■□□□ 1.17
PABPC1-215ENST00000520804 BTG3Q14201 252 aaPredicted RBP22.33■■□□□ 1.17
PABPC1-215ENST00000520804 TCEAL5Q5H9L2 206 aa22.33■■□□□ 1.17
PABPC1-215ENST00000520804 MIS18BP1Q6P0N0 1132 aa22.33■■□□□ 1.17
PABPC1-215ENST00000520804 CLP1Q92989 425 aaKnown RBP22.33■■□□□ 1.17
PABPC1-215ENST00000520804 C1QTNF1Q9BXJ1 281 aa22.33■■□□□ 1.17
PABPC1-215ENST00000520804 NSUN3Q9H649 340 aaKnown RBP22.33■■□□□ 1.17
PABPC1-215ENST00000520804 ZNF302Q9NR11 478 aa22.33■■□□□ 1.17
PABPC1-215ENST00000520804 LOXHD1Q8IVV2 1947 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 GNA11P29992 359 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 SETQ01105 290 aaPredicted RBP22.32■■□□□ 1.16
PABPC1-215ENST00000520804 KRT76Q01546 638 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 PAK2Q13177 524 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 PDXDC2PQ6P474 469 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 CRIPAKQ8N1N5 446 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 PHKBQ93100 1093 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 ZNF577Q9BSK1 485 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 C11orf84Q9BUA3 381 aaPredicted RBP22.32■■□□□ 1.16
PABPC1-215ENST00000520804 TBC1D22BQ9NU19 505 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 COL1A2P08123 1366 aa22.32■■□□□ 1.16
PABPC1-215ENST00000520804 ATP4AP20648 1035 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 AKAP17AQ02040 695 aaKnown RBP22.31■■□□□ 1.16
PABPC1-215ENST00000520804 NTRK3Q16288 839 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 ZNF484Q5JVG2 852 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 SWSAP1Q6NVH7 229 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 NPAS4Q8IUM7 802 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 NEK9Q8TD19 979 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 PABPC5Q96DU9 382 aaKnown RBP22.31■■□□□ 1.16
PABPC1-215ENST00000520804 CCDC136Q96JN2 1154 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 UIMC1Q96RL1 719 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 RNF26Q9BY78 433 aaPredicted RBP22.31■■□□□ 1.16
PABPC1-215ENST00000520804 LMAN2LQ9H0V9 348 aa22.31■■□□□ 1.16
PABPC1-215ENST00000520804 GRM6O15303 877 aa22.3■■□□□ 1.16
PABPC1-215ENST00000520804 REC8O95072 547 aa22.3■■□□□ 1.16
PABPC1-215ENST00000520804 PSMA5P28066 241 aa22.3■■□□□ 1.16
PABPC1-215ENST00000520804 COL19A1Q14993 1142 aa22.3■■□□□ 1.16
PABPC1-215ENST00000520804 ZNF746Q6NUN9 644 aaPredicted RBP22.3■■□□□ 1.16
PABPC1-215ENST00000520804 CMTR2Q8IYT2 770 aaKnown RBP22.3■■□□□ 1.16
PABPC1-215ENST00000520804 TMX1Q9H3N1 280 aa22.3■■□□□ 1.16
PABPC1-215ENST00000520804 EPHX3Q9H6B9 360 aa22.3■■□□□ 1.16
PABPC1-215ENST00000520804 ZBTB42B2RXF5 422 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 CIITAP33076 1130 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 EVCP57679 992 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 PUS10Q3MIT2 529 aaKnown RBP22.29■■□□□ 1.16
PABPC1-215ENST00000520804 PTCRAQ6ISU1 281 aaPredicted RBP22.29■■□□□ 1.16
PABPC1-215ENST00000520804 SMAP1Q8IYB5 467 aaPredicted RBP22.29■■□□□ 1.16
PABPC1-215ENST00000520804 KIAA0319LQ8IZA0 1049 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 BICD2Q8TD16 824 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 RASGRP4Q8TDF6 673 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 PLVAPQ9BX97 442 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 CD320Q9NPF0 282 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 MAFBQ9Y5Q3 323 aaPredicted RBP22.29■■□□□ 1.16
PABPC1-215ENST00000520804 MRPL42Q9Y6G3 142 aaKnown RBP22.29■■□□□ 1.16
PABPC1-215ENST00000520804 ATG2AQ2TAZ0 1938 aa22.29■■□□□ 1.16
PABPC1-215ENST00000520804 GRXCR2A6NFK2 248 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms