RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 SYTL5Q8TDW5 730 aaPredicted RBP12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 GMCL1Q96IK5 515 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 EMILIN3Q9NT22 766 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 CLIC4Q9Y696 253 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 GSTTP1A0A1W2PQM5 241 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 TYW5A2RUC4 315 aaKnown RBP12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 LAD1O00515 517 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 TRAPPC3O43617 180 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 ZC3H11AO75152 810 aaKnown RBP eCLIP12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 CLCN3P51790 818 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 RUFY1Q96T51 708 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 HINFPQ9BQA5 517 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 KIF9Q9HAQ2 790 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 CEP290O15078 2479 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 KPNA6O60684 536 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 ACTR2P61160 394 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 CERS4Q9HA82 394 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 HUS1O60921 280 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 TNFAIP3P21580 790 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 PPP1R2P41236 205 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 NPEPPSP55786 919 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 VEPH1Q14D04 833 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 CCDC50Q8IVM0 306 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 SNX21Q969T3 373 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 MXRA8Q9BRK3 442 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 PDCD2LQ9BRP1 358 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 C2orf40Q9H1Z8 148 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 PTCH2Q9Y6C5 1203 aa12.95□□□□□ -0.34
PCDHGB6-201ENST00000520790 RGPD8O14715 1765 aaPredicted RBP12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 ITGA4P13612 1032 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 PTPREP23469 700 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 KLRC1P26715 233 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 TSPY1Q01534 308 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 SHROOM1Q2M3G4 852 aaPredicted RBP12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 SLC30A10Q6XR72 485 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 ALS2CR12Q96Q35 445 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 LRRC4Q9HBW1 653 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 SDK1Q7Z5N4 2213 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 YWHABP31946 246 aaKnown RBP12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 USP11P51784 963 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 PAK1Q13153 545 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 SCYL2Q6P3W7 929 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 COPS5Q92905 334 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 LRRC45Q96CN5 670 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 VTA1Q9NP79 307 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 SH3GLB2Q9NR46 395 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 SNCAIPQ9Y6H5 919 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 CSDE1O75534 798 aaKnown RBP12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 SP100P23497 879 aaPredicted RBP12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 ANO6Q4KMQ2 910 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
PCDHGB6-201ENST00000520790 RSPH10B2B2RC85 870 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 RSPH10BP0C881 870 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 PLCG1P19174 1290 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 PRMT2P55345 433 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 PPP2R3AQ06190 1150 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 HOOK3Q86VS8 718 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 PAWRQ96IZ0 340 aaKnown RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 RNPC3Q96LT9 517 aaKnown RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 CTAGE1Q96RT6 745 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 SRRTQ9BXP5 876 aaKnown RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 TMX1Q9H3N1 280 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 MAFGO15525 162 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 IKBKEQ14164 716 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 RIOX2Q8IUF8 465 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 PGBD3Q8N328 593 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 RYBPQ8N488 228 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 AK8Q96MA6 479 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 MTA3Q9BTC8 594 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 USTQ9Y2C2 406 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 TLL2Q9Y6L7 1015 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 ALDH5A1P51649 535 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 EPHA7Q15375 998 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 MTERF4Q7Z6M4 381 aaKnown RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 BEST2Q8NFU1 509 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 DNAJB3Q8WWF6 145 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 MAP1BP46821 2468 aaKnown RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 LARGE1O95461 756 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 GAP43P17677 238 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 TMEM132BQ14DG7 1078 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 MUM1L1Q5H9M0 696 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 NLRC4Q9NPP4 1024 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 USP25Q9UHP3 1055 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 SSX2IPQ9Y2D8 614 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 PCDHB12Q9Y5F1 795 aa12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 CICQ96RK0 1608 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB6-201ENST00000520790 SMIM22K7EJ46 135 aa12.92□□□□□ -0.34
PCDHGB6-201ENST00000520790 VTNP04004 478 aa12.92□□□□□ -0.34
PCDHGB6-201ENST00000520790 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
PCDHGB6-201ENST00000520790 SLC17A8Q8NDX2 589 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms