RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 GJC1P36383 396 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 SREBF1P36956 1147 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 MYL7Q01449 175 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 ALKBH5Q6P6C2 394 aaKnown RBP11.1□□□□□ -0.63
MCF2-209ENST00000520602 SCFD1Q8WVM8 642 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 CEP170P1Q96L14 293 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 CICQ96RK0 1608 aaPredicted RBP11.1□□□□□ -0.63
MCF2-209ENST00000520602 DNAJC7Q99615 494 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 MYH13Q9UKX3 1938 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 PACSIN2Q9UNF0 486 aaPredicted RBP11.1□□□□□ -0.63
MCF2-209ENST00000520602 EXOC7Q9UPT5 735 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 TMX2Q9Y320 296 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 NWD2Q9ULI1 1742 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 ZBTB39O15060 712 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 ARP10275 920 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 CAP2P40123 477 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 IFFO1Q0D2I5 559 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 NAA35Q5VZE5 725 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 NOA1Q8NC60 698 aaKnown RBP11.1□□□□□ -0.63
MCF2-209ENST00000520602 GMCL1P1Q8NEA9 526 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 MKL1Q969V6 931 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 MMS19Q96T76 1030 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
MCF2-209ENST00000520602 MORC2Q9Y6X9 1032 aaPredicted RBP11.1□□□□□ -0.63
MCF2-209ENST00000520602 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 OTUD6AQ7L8S5 288 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 EEPD1Q7L9B9 569 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 SYT2Q8N9I0 419 aaPredicted RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 GOLGA5Q8TBA6 731 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 GLIS2Q9BZE0 524 aaPredicted RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 SNED1Q8TER0 1413 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 GOLGA6L10A0A0M3HER8 536 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 PALMO75781 387 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 GUCY2FP51841 1108 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 SETQ01105 290 aaPredicted RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 GSPT2Q8IYD1 628 aaKnown RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 RPAP3Q9H6T3 665 aaPredicted RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 RNF146Q9NTX7 359 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 SEPT9Q9UHD8 586 aaPredicted RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 CNOT7Q9UIV1 285 aaKnown RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 PLAGL2Q9UPG8 496 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 USP14P54578 494 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 HMGCS2P54868 508 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 DMP1Q13316 513 aaPredicted RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 GIT2Q14161 759 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 TMEM119Q4V9L6 283 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 SNRNP48Q6IEG0 339 aaKnown RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 POMGNT1Q8WZA1 660 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 PDGFDQ9GZP0 370 aaPredicted RBP11.09□□□□□ -0.63
MCF2-209ENST00000520602 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
MCF2-209ENST00000520602 EML1O00423 815 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 SLC16A4O15374 487 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 HIP1RO75146 1068 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 TNNI1P19237 187 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 HERVK_113P62684 666 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 VSNL1P62760 191 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 LLGL1Q15334 1064 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 CFAP58Q5T655 872 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 KRT12Q99456 494 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 RABEP2Q9H5N1 569 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 UBE2TQ9NPD8 197 aaPredicted RBP11.08□□□□□ -0.64
MCF2-209ENST00000520602 KCND1Q9NSA2 647 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 SMARCAL1Q9NZC9 954 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 PAPPAQ13219 1627 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 GOLGA6BA6NDN3 693 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 YDJCA8MPS7 323 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 PDXKO00764 312 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 HNRNPDLO14979 420 aaKnown RBP11.08□□□□□ -0.64
MCF2-209ENST00000520602 SPOPO43791 374 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 PBX1P40424 430 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 GCLMP48507 274 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 CASP4P49662 377 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 CDR1P51861 262 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 STRN3Q13033 797 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 EPHA7Q15375 998 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 GNPTABQ3T906 1256 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 GRIPAP1Q4V328 841 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 RINT1Q6NUQ1 792 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 SEPT14Q6ZU15 432 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 APTXQ7Z2E3 356 aaKnown RBP11.08□□□□□ -0.64
MCF2-209ENST00000520602 IFT20Q8IY31 132 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 BZW2Q9Y6E2 419 aaKnown RBP11.08□□□□□ -0.64
MCF2-209ENST00000520602 KLRG2A4D1S0 409 aaPredicted RBP11.08□□□□□ -0.64
MCF2-209ENST00000520602 P4HBP07237 508 aaKnown RBP11.08□□□□□ -0.64
MCF2-209ENST00000520602 QARSP47897 775 aaKnown RBP11.08□□□□□ -0.64
MCF2-209ENST00000520602 GUCY2DQ02846 1103 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 GADL1Q6ZQY3 521 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 ZNF507Q8TCN5 953 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 ACCSQ96QU6 501 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 FAM107BQ9H098 131 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 CCDC113Q9H0I3 377 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 SUGCTQ9HAC7 445 aa11.08□□□□□ -0.64
MCF2-209ENST00000520602 ARHGAP20Q9P2F6 1191 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms