RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 PSMC4P43686 418 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 QARSP47897 775 aaKnown RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 PSMC5P62195 406 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 AMPD3Q01432 767 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 MORC3Q14149 939 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 CCL14Q16627 93 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 UGCGQ16739 394 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 LY6KQ17RY6 165 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 CELF3Q5SZQ8 465 aaKnown RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 CCDC60Q8IWA6 550 aaPredicted RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 TPH2Q8IWU9 490 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 C4orf19Q8IY42 314 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 SYT2Q8N9I0 419 aaPredicted RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 CCDC47Q96A33 483 aaKnown RBP9.51□□□□□ -0.89
VAPB-206ENST00000520497 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 RBSNQ9H1K0 784 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 BLZF1Q9H2G9 400 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 ZSWIM4Q9H7M6 989 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 MAN1B1Q9UKM7 699 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 DNM3Q9UQ16 869 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 SAMM50Q9Y512 469 aa9.51□□□□□ -0.89
VAPB-206ENST00000520497 GSTTP1A0A1W2PQM5 241 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 BECN2A8MW95 431 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 BIN1O00499 593 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 ZBTB39O15060 712 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 ZNF862O60290 1169 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 RHOBTB3O94955 611 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 STBD1O95210 358 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 RPN1P04843 607 aaKnown RBP9.5□□□□□ -0.89
VAPB-206ENST00000520497 TXNP10599 105 aaKnown RBP9.5□□□□□ -0.89
VAPB-206ENST00000520497 XRCC6P12956 609 aaKnown RBP eCLIP9.5□□□□□ -0.89
VAPB-206ENST00000520497 CYP11B2P19099 503 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 CYP2B6P20813 491 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 NLRP12P59046 1061 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 ARHGAP1Q07960 439 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 EHHADHQ08426 723 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 ACVR2BQ13705 512 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 KCNB1Q14721 858 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 DPCR1Q3MIW9 517 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 DUSP28Q4G0W2 176 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 ANO6Q4KMQ2 910 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 ARSHQ5FYA8 562 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 TMEM63BQ5T3F8 832 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 MIS18BP1Q6P0N0 1132 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 FBXO46Q6PJ61 603 aaPredicted RBP9.5□□□□□ -0.89
VAPB-206ENST00000520497 C11orf57Q6ZUT1 292 aaPredicted RBP9.5□□□□□ -0.89
VAPB-206ENST00000520497 PIGOQ8TEQ8 1089 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 DDX12PQ92771 950 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 ATP6V0A1Q93050 837 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 EMID1Q96A84 441 aaPredicted RBP9.5□□□□□ -0.89
VAPB-206ENST00000520497 DNAJC19Q96DA6 116 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 GTPBP4Q9BZE4 634 aaKnown RBP9.5□□□□□ -0.89
VAPB-206ENST00000520497 LRRC27Q9C0I9 530 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 BHMT2Q9H2M3 363 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 DBR1Q9UK59 544 aaKnown RBP9.5□□□□□ -0.89
VAPB-206ENST00000520497 GABRQQ9UN88 632 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 TRIM17Q9Y577 477 aa9.5□□□□□ -0.89
VAPB-206ENST00000520497 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.49□□□□□ -0.89
VAPB-206ENST00000520497 PVALEFA0A1B0GWK0 134 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 FRMD3A2A2Y4 597 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 SMTNL1A8MU46 457 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 NKRFO15226 690 aaKnown RBP eCLIP9.49□□□□□ -0.893e-6■■□□□ 12
VAPB-206ENST00000520497 ADCY6O43306 1168 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 LGR5O75473 907 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 SLC34A2O95436 690 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 GH1P01241 217 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 ZNF865P0CJ78 1059 aaPredicted RBP9.49□□□□□ -0.89
VAPB-206ENST00000520497 CYP2C19P33261 490 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 FLT3LGP49771 235 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 RARRES1P49788 294 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 ZNF165P49910 485 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 ASIC1P78348 528 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 SP4Q02446 784 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 PRKCZQ05513 592 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 DHX8Q14562 1220 aaKnown RBP9.49□□□□□ -0.89
VAPB-206ENST00000520497 KIF22Q14807 665 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 CCDC144BQ3MJ40 725 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 HSDL1Q3SXM5 330 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 KMT5BQ4FZB7 885 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 RINT1Q6NUQ1 792 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 SWSAP1Q6NVH7 229 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 UNC13DQ70J99 1090 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 GPBP1Q86WP2 473 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 DHX37Q8IY37 1157 aaKnown RBP9.49□□□□□ -0.89
VAPB-206ENST00000520497 RNF214Q8ND24 703 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 AFAP1L1Q8TED9 768 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 SEPT1Q8WYJ6 367 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 TRIB2Q92519 343 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 COPS5Q92905 334 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 TRIM44Q96DX7 344 aaPredicted RBP9.49□□□□□ -0.89
VAPB-206ENST00000520497 PCYT2Q99447 389 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 GPR20Q99678 358 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 RUSC1Q9BVN2 902 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 DNAJC25Q9H1X3 360 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 MLXIPQ9HAP2 919 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 ANKEF1Q9NU02 776 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 RMND1Q9NWS8 449 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 KCND2Q9NZV8 630 aa9.49□□□□□ -0.89
VAPB-206ENST00000520497 GABBR1Q9UBS5 961 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms