RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 WFDC3Q8IUB2 231 aa9.58□□□□□ -0.88
LSM1-202ENST00000520286 NETO2Q8NC67 525 aa9.58□□□□□ -0.88
LSM1-202ENST00000520286 CLEC4DQ8WXI8 215 aa9.58□□□□□ -0.88
LSM1-202ENST00000520286 PRDM11Q9NQV5 511 aa9.58□□□□□ -0.88
LSM1-202ENST00000520286 DNAJC28Q9NX36 388 aa9.58□□□□□ -0.88
LSM1-202ENST00000520286 KCNG1Q9UIX4 513 aa9.58□□□□□ -0.88
LSM1-202ENST00000520286 CC2D2AQ9P2K1 1620 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 RASSF10A6NK89 507 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 SGSM2O43147 1006 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 EFEMP2O95967 443 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 PROCP04070 461 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 LPOP22079 712 aaPredicted RBP9.57□□□□□ -0.88
LSM1-202ENST00000520286 GORABQ5T7V8 394 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 CXorf67Q86X51 503 aaPredicted RBP9.57□□□□□ -0.88
LSM1-202ENST00000520286 MORC4Q8TE76 937 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 JADE3Q92613 823 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 LRGUKQ96M69 825 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 AIFM3Q96NN9 605 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 RPS6KC1Q96S38 1066 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 PALD1Q9ULE6 856 aa9.57□□□□□ -0.88
LSM1-202ENST00000520286 TCRBV5S2A0A599 114 aa9.56□□□□□ -0.88
LSM1-202ENST00000520286 PSPNO60542 156 aa9.56□□□□□ -0.88
LSM1-202ENST00000520286 ZRANB2O95218 330 aaKnown RBP eCLIP9.56□□□□□ -0.88
LSM1-202ENST00000520286 ENPP1P22413 925 aa9.56□□□□□ -0.88
LSM1-202ENST00000520286 NR0B2Q15466 257 aa9.56□□□□□ -0.88
LSM1-202ENST00000520286 FSCN1Q16658 493 aaKnown RBP9.56□□□□□ -0.88
LSM1-202ENST00000520286 C7orf31Q8N865 590 aa9.56□□□□□ -0.88
LSM1-202ENST00000520286 PDGFDQ9GZP0 370 aaPredicted RBP9.56□□□□□ -0.88
LSM1-202ENST00000520286 ANLNQ9NQW6 1124 aa9.56□□□□□ -0.88
LSM1-202ENST00000520286 RCAN3Q9UKA8 241 aa9.56□□□□□ -0.88
LSM1-202ENST00000520286 LOC102724159A0A0B4J2E5 919 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 PRNPP04156 253 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 SRSF2Q01130 221 aaKnown RBP9.55□□□□□ -0.88
LSM1-202ENST00000520286 GRIN1Q05586 938 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 PWP2Q15269 919 aaKnown RBP9.55□□□□□ -0.88
LSM1-202ENST00000520286 CT83Q5H943 113 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 TOR2AQ5JU69 321 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 SYCP2LQ5T4T6 812 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 ESPNLQ6ZVH7 1005 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 MILR1Q7Z6M3 343 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 PHYKPLQ8IUZ5 450 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 EXOC8Q8IYI6 725 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 ERCC4Q92889 916 aaPredicted RBP9.55□□□□□ -0.88
LSM1-202ENST00000520286 SPOCK3Q9BQ16 436 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 ANO3Q9BYT9 981 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 QRSL1Q9H0R6 528 aaKnown RBP9.55□□□□□ -0.88
LSM1-202ENST00000520286 SEMA4AQ9H3S1 761 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 RC3H2Q9HBD1 1191 aaKnown RBP9.55□□□□□ -0.88
LSM1-202ENST00000520286 RXFP1Q9HBX9 757 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 NUDT5Q9UKK9 219 aa9.55□□□□□ -0.88
LSM1-202ENST00000520286 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.54□□□□□ -0.88
LSM1-202ENST00000520286 ACOT7O00154 380 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 COBLO75128 1261 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 MMEP08473 750 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 CLEC2LP0C7M8 214 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 ARL4AP40617 200 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 MANFP55145 182 aaKnown RBP9.54□□□□□ -0.88
LSM1-202ENST00000520286 ERVFC1P60507 584 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 MOGSQ13724 837 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 UGT8Q16880 541 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 ARHGAP29Q52LW3 1261 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 TIGD5Q53EQ6 642 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 SLC23A3Q6PIS1 610 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 NLRX1Q86UT6 975 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 ASB15Q8WXK1 588 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 SSH1Q8WYL5 1049 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 C19orf44Q9H6X5 657 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 CHST12Q9NRB3 414 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 GPR160Q9UJ42 338 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 GPR45Q9Y5Y3 372 aa9.54□□□□□ -0.88
LSM1-202ENST00000520286 ERC2O15083 957 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 HPXP02790 462 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 ASGR2P07307 311 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 HSPA6P17066 643 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 AGXTP21549 392 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 HERVK_113P62684 666 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 RRP12Q5JTH9 1297 aaKnown RBP9.53□□□□□ -0.88
LSM1-202ENST00000520286 PRSS36Q5K4E3 855 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 VSIG10LQ86VR7 867 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 ARRDC4Q8NCT1 418 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 FLCNQ8NFG4 579 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 TIFAQ96CG3 184 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 EAF2Q96CJ1 260 aaPredicted RBP9.53□□□□□ -0.88
LSM1-202ENST00000520286 PEX11GQ96HA9 241 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 GBP4Q96PP9 640 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 POFUT1Q9H488 388 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 CCDC39Q9UFE4 941 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 EDARQ9UNE0 448 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 PPP2R3BQ9Y5P8 575 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 UNC13AQ9UPW8 1703 aa9.53□□□□□ -0.88
LSM1-202ENST00000520286 UBA6A0AVT1 1052 aaPredicted RBP9.52□□□□□ -0.89
LSM1-202ENST00000520286 MSTNO14793 375 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 SRGAP3O43295 1099 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 DBHP09172 617 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 PNLIPP16233 465 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 FUT4P22083 530 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 MTNR1BP49286 362 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 PURAQ00577 322 aaKnown RBP9.52□□□□□ -0.89
LSM1-202ENST00000520286 OS9Q13438 667 aaPredicted RBP9.52□□□□□ -0.89
LSM1-202ENST00000520286 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms