RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 KCNV1Q6PIU1 500 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 BTNL9Q6UXG8 535 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 FAM43BQ6ZT52 329 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-207ENST00000520168 KCTD1Q719H9 257 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 FRMD5Q7Z6J6 570 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 PRR7Q8TB68 274 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 RHPN1Q8TCX5 695 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 DCAF4Q8WV16 495 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 SUSD6Q92537 303 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 COPS5Q92905 334 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 BORCS6Q96GS4 357 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 RPGRIP1Q96KN7 1286 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 NEK1Q96PY6 1258 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 IWS1Q96ST2 819 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 HAUS7Q99871 368 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 ALG1Q9BT22 464 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 NACAP1Q9BZK3 213 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 RC3H2Q9HBD1 1191 aaKnown RBP5.74□□□□□ -1.49
SDCBP-207ENST00000520168 INCENPQ9NQS7 918 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 CLEC1BQ9P126 229 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 STX8Q9UNK0 236 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 SORCS3Q9UPU3 1222 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 DENND4AQ7Z401 1863 aa5.74□□□□□ -1.49
SDCBP-207ENST00000520168 CHD6Q8TD26 2715 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 LOC100996750A0A140TA64 210 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 MED19A0JLT2 244 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 C17orf102A2RUQ5 167 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 GSG1L2A8MUP6 293 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 LINC01565O15544 149 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 KRT37O76014 449 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 LMNAP02545 664 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 RPLP2P05387 115 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 LINC00271P0C7V0 271 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 TIMP2P16035 220 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 HOXB8P17481 243 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 NDUFV2P19404 249 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 HOXC8P31273 242 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 GTF2F1P35269 517 aaKnown RBP eCLIP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 WDR4P57081 412 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 TFAP4Q01664 338 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 UBE3AQ05086 875 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 BTG3Q14201 252 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 STXBP2Q15833 593 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 ZKSCAN2Q63HK3 967 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 PDE12Q6L8Q7 609 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 ZC3H14Q6PJT7 736 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 SLC30A10Q6XR72 485 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 PARP9Q8IXQ6 854 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 FTSJ3Q8IY81 847 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 TMEM57Q8N5G2 664 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 TMEM105Q8N8V8 129 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 FAM174AQ8TBP5 190 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 NSUN6Q8TEA1 469 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 PPP1R13LQ8WUF5 828 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 FRAT1Q92837 279 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 ATP6V0A1Q93050 837 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 ZNF689Q96CS4 500 aaPredicted RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 RMDN1Q96DB5 314 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 NECTIN4Q96NY8 510 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 PURBQ96QR8 312 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 STRBPQ96SI9 672 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 ZMYND15Q9H091 742 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 PUS7LQ9H0K6 701 aaKnown RBP5.73□□□□□ -1.49
SDCBP-207ENST00000520168 MFSD1Q9H3U5 465 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 PLAGL2Q9UPG8 496 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 EXOC6BQ9Y2D4 811 aa5.73□□□□□ -1.49
SDCBP-207ENST00000520168 TSPY2A6NKD2 308 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 HMMRO75330 724 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 PRDM1O75626 825 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 GLP2RO95838 553 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 ZFYP08048 801 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-207ENST00000520168 ZNF286BP0CG31 522 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 NRIP1P48552 1158 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 AMHR2Q16671 573 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 LY6KQ17RY6 165 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CCDC96Q2M329 555 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 SYDE2Q5VT97 1194 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CEP85Q6P2H3 762 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 TMEM184AQ6ZMB5 413 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 SEPT14Q6ZU15 432 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CHST3Q7LGC8 479 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CMTR2Q8IYT2 770 aaKnown RBP5.72□□□□□ -1.49
SDCBP-207ENST00000520168 KREMEN2Q8NCW0 462 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 RASGRP4Q8TDF6 673 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CLEC4DQ8WXI8 215 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 WNT8BQ93098 351 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CLUAP1Q96AJ1 413 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 YTHDC1Q96MU7 727 aaKnown RBP5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CNTNAP3BQ96NU0 1288 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 RTP3Q9BQQ7 232 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 KLF16Q9BXK1 252 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CNTNAP3Q9BZ76 1288 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 IL1RAPL2Q9NP60 686 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 DLL3Q9NYJ7 618 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 DDX41Q9UJV9 622 aaKnown RBP5.72□□□□□ -1.49
SDCBP-207ENST00000520168 BARX2Q9UMQ3 279 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-207ENST00000520168 PCDHGC5Q9Y5F6 944 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 MRVI1Q9Y6F6 885 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms