RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 UBE4AQ14139 1066 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 KIR3DS1Q14943 382 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 PAQR3Q6TCH7 311 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 TTLL7Q6ZT98 887 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 ESPNLQ6ZVH7 1005 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 CXorf67Q86X51 503 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 TPH2Q8IWU9 490 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 FLCNQ8NFG4 579 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 CLEC4DQ8WXI8 215 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 RTF1Q92541 710 aaKnown RBP6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 ZNF496Q96IT1 587 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 POLR3GLQ9BT43 218 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 C19orf73Q9NVV2 129 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 PALD1Q9ULE6 856 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 ASB1Q9Y576 335 aa6.93□□□□□ -1.3
HMGB1P46-201ENST00000520062 PRAMEF25A6NGN4 478 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 RASSF10A6NK89 507 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 ERC2O15083 957 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 PSPNO60542 156 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 EFEMP2O95967 443 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 DBHP09172 617 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 HDAC1Q13547 482 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 SLC9A5Q14940 896 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 ODF1Q14990 250 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 C7orf31Q8N865 590 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 MAML3Q96JK9 1138 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 PSMD1Q99460 953 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 PAK6Q9NQU5 681 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 ZNF277Q9NRM2 450 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 OBP2AQ9NY56 170 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 GPR160Q9UJ42 338 aa6.92□□□□□ -1.3
HMGB1P46-201ENST00000520062 PEX14O75381 377 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 MTHFD2P13995 350 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 LPOP22079 712 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 AKAP5P24588 427 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 CD97P48960 835 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 MTNR1BP49286 362 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 MANFP55145 182 aaKnown RBP6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 RHBDL3P58872 404 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 ERVFRD-1P60508 538 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 CLUL1Q15846 466 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 EPM2AIP1Q7L775 607 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 MILR1Q7Z6M3 343 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 RBM12BQ8IXT5 1001 aaKnown RBP6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 FBXO41Q8TF61 875 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 ASB15Q8WXK1 588 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 SHISA4Q96DD7 197 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 CLIP3Q96DZ5 547 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 TEKT5Q96M29 485 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 ZNF700Q9H0M5 742 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 PRDM7Q9NQW5 492 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 DNAJC28Q9NX36 388 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 HSPBP1Q9NZL4 362 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 ANGEL1Q9UNK9 670 aaKnown RBP6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 RIPOR2Q9Y4F9 1068 aa6.91□□□□□ -1.3
HMGB1P46-201ENST00000520062 UBA6A0AVT1 1052 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 LCHNA4D1U4 455 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 VSTM5A8MXK1 200 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 ACOT7O00154 380 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 TPD52L2O43399 206 aaKnown RBP6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 ZRANB2O95218 330 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 IL33O95760 270 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 TMEM253P0C7T8 217 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 FAHP16930 419 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 AGXTP21549 392 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 HTRA3P83110 453 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 NR1I3Q14994 352 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 TIGD5Q53EQ6 642 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 TIGD7Q6NT04 549 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 RTN4RL1Q86UN2 441 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 AGBL5Q8NDL9 886 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 MYLIPQ8WY64 445 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 JADE3Q92613 823 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 FOXRED1Q96CU9 486 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 TSPAN17Q96FV3 270 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 RAX2Q96IS3 184 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 GBP4Q96PP9 640 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 SIT1Q9Y3P8 196 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 GPR45Q9Y5Y3 372 aa6.9□□□□□ -1.3
HMGB1P46-201ENST00000520062 GOLGA6L22H0YM25 854 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 MMEP08473 750 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 AOAHP28039 575 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 ADKP55263 362 aaKnown RBP6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 ERVFC1P60507 584 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 MRPS9P82933 396 aaKnown RBP6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 PURAQ00577 322 aaKnown RBP6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 GBX1Q14549 363 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 ACAP2Q15057 778 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 UGT8Q16880 541 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 RRP12Q5JTH9 1297 aaKnown RBP6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 TTC38Q5R3I4 469 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 ARRDC4Q8NCT1 418 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 TGFBRAP1Q8WUH2 860 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 PMM1Q92871 262 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 FOXB1Q99853 325 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 CSRNP2Q9H175 543 aa6.89□□□□□ -1.31
HMGB1P46-201ENST00000520062 SEMA6BQ9H3T3 888 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms