RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 NID2Q14112 1375 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 COL4A6Q14031 1691 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 DDX39AO00148 427 aaKnown RBP14.16□□□□□ -0.14
CSMD1-205ENST00000519623 RPLP2P05387 115 aaKnown RBP14.16□□□□□ -0.14
CSMD1-205ENST00000519623 CD52P31358 61 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 SLC26A2P50443 739 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 EVCP57679 992 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 GPM6BQ13491 265 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 MTHFD1LQ6UB35 978 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 CRIPAKQ8N1N5 446 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 LINC01599Q8WXQ3 324 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 PHKBQ93100 1093 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 ZNF689Q96CS4 500 aaPredicted RBP14.16□□□□□ -0.14
CSMD1-205ENST00000519623 RC3H2Q9HBD1 1191 aaKnown RBP14.16□□□□□ -0.14
CSMD1-205ENST00000519623 C6orf50Q9HD87 102 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 NLRC5Q86WI3 1866 aa14.16□□□□□ -0.14
CSMD1-205ENST00000519623 SMIM35A0A1B0GVV1 85 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 IPO5O00410 1097 aaKnown RBP14.15□□□□□ -0.14
CSMD1-205ENST00000519623 EDIL3O43854 480 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 ATP4AP20648 1035 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 KLRC1P26715 233 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 PSMA5P28066 241 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
CSMD1-205ENST00000519623 TMEM62Q0P6H9 643 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 MCTP2Q6DN12 878 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 CCDC60Q8IWA6 550 aaPredicted RBP14.15□□□□□ -0.14
CSMD1-205ENST00000519623 NME8Q8N427 588 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 FIBCD1Q8N539 461 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 ATP8B4Q8TF62 1192 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 UIMC1Q96RL1 719 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 CELF4Q9BZC1 486 aaKnown RBP14.15□□□□□ -0.14
CSMD1-205ENST00000519623 UBE2ZQ9H832 354 aaPredicted RBP14.15□□□□□ -0.14
CSMD1-205ENST00000519623 PADI3Q9ULW8 664 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 TRPV2Q9Y5S1 764 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 EVPLQ92817 2033 aa14.15□□□□□ -0.14
CSMD1-205ENST00000519623 KDM3AQ9Y4C1 1321 aa14.15□□□□□ -0.15
CSMD1-205ENST00000519623 ZBTB42B2RXF5 422 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 C5orf67F2Z3F1 127 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 HBP1O60381 514 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 PPFIA3O75145 1194 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 DGKIO75912 1065 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 REC8O95072 547 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 IFNAR1P17181 557 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 GNA11P29992 359 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 CIITAP33076 1130 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 BMPR1AP36894 532 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 PTPROQ16827 1216 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 FAM160B1Q5W0V3 765 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 SWSAP1Q6NVH7 229 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 KIAA0319LQ8IZA0 1049 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
CSMD1-205ENST00000519623 CCDC12Q8WUD4 166 aaPredicted RBP14.14□□□□□ -0.15
CSMD1-205ENST00000519623 CLP1Q92989 425 aaKnown RBP14.14□□□□□ -0.15
CSMD1-205ENST00000519623 ZNF577Q9BSK1 485 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 ZNF302Q9NR11 478 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 TBC1D22BQ9NU19 505 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 RALGAPA2Q2PPJ7 1873 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 IGSF9BQ9UPX0 1349 aa14.14□□□□□ -0.15
CSMD1-205ENST00000519623 MYH9P35579 1960 aaKnown RBP14.13□□□□□ -0.15
CSMD1-205ENST00000519623 BACH1O14867 736 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 RB1P06400 928 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 CCT2P78371 535 aaKnown RBP14.13□□□□□ -0.15
CSMD1-205ENST00000519623 KRT76Q01546 638 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 TOB2Q14106 344 aaPredicted RBP14.13□□□□□ -0.15
CSMD1-205ENST00000519623 LEXMQ3ZCV2 418 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 ZNF484Q5JVG2 852 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 MIS18BP1Q6P0N0 1132 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 PDXDC2PQ6P474 469 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 BANK1Q8NDB2 785 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.13□□□□□ -0.15
CSMD1-205ENST00000519623 RASGRP4Q8TDF6 673 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 LENG9Q96B70 501 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 FTHL17Q9BXU8 183 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 RNF26Q9BY78 433 aaPredicted RBP14.13□□□□□ -0.15
CSMD1-205ENST00000519623 TMX1Q9H3N1 280 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 CDHR5Q9HBB8 845 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 NCOA5Q9HCD5 579 aaKnown RBP14.13□□□□□ -0.15
CSMD1-205ENST00000519623 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 MAFBQ9Y5Q3 323 aaPredicted RBP14.13□□□□□ -0.15
CSMD1-205ENST00000519623 ADGRA3Q8IWK6 1321 aa14.13□□□□□ -0.15
CSMD1-205ENST00000519623 M0QZ92 97 aa14.12□□□□□ -0.15
CSMD1-205ENST00000519623 EPB41L2O43491 1005 aaKnown RBP14.12□□□□□ -0.15
CSMD1-205ENST00000519623 AKAP17AQ02040 695 aaKnown RBP14.12□□□□□ -0.15
CSMD1-205ENST00000519623 COL19A1Q14993 1142 aa14.12□□□□□ -0.15
CSMD1-205ENST00000519623 TCEAL5Q5H9L2 206 aa14.12□□□□□ -0.15
CSMD1-205ENST00000519623 ZNF746Q6NUN9 644 aaPredicted RBP14.12□□□□□ -0.15
CSMD1-205ENST00000519623 BICD2Q8TD16 824 aa14.12□□□□□ -0.15
CSMD1-205ENST00000519623 SLC26A6Q9BXS9 759 aa14.12□□□□□ -0.15
CSMD1-205ENST00000519623 WDR81Q562E7 1941 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 COL1A2P08123 1366 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 GRM6O15303 877 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 KCNA5P22460 613 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 CTNNB1P35222 781 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 SETQ01105 290 aaPredicted RBP14.11□□□□□ -0.15
CSMD1-205ENST00000519623 PAK2Q13177 524 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 BTG3Q14201 252 aaPredicted RBP14.11□□□□□ -0.15
CSMD1-205ENST00000519623 TMEM266Q2M3C6 531 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 TIGD5Q53EQ6 642 aa14.11□□□□□ -0.15
CSMD1-205ENST00000519623 PRR16Q569H4 304 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms