RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ID4P47928 161 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 KPNA1P52294 538 aaPredicted RBP8.65□□□□□ -1.02
PTPN12-213ENST00000519553 AMPD3Q01432 767 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 SART3Q15020 963 aaKnown RBP8.65□□□□□ -1.02
PTPN12-213ENST00000519553 TTLL6Q8N841 843 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 FOXRED1Q96CU9 486 aaPredicted RBP8.65□□□□□ -1.02
PTPN12-213ENST00000519553 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 EMC7Q9NPA0 242 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 ARHGAP28Q9P2N2 729 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 ASB1Q9Y576 335 aa8.65□□□□□ -1.02
PTPN12-213ENST00000519553 IL18BPO95998 194 aa8.64□□□□□ -1.03
PTPN12-213ENST00000519553 AFF3P51826 1226 aaKnown RBP8.64□□□□□ -1.03
PTPN12-213ENST00000519553 C1QL4Q86Z23 238 aa8.64□□□□□ -1.03
PTPN12-213ENST00000519553 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
PTPN12-213ENST00000519553 USP7Q93009 1102 aa8.64□□□□□ -1.03
PTPN12-213ENST00000519553 GPATCH3Q96I76 525 aa8.64□□□□□ -1.03
PTPN12-213ENST00000519553 CLIC6Q96NY7 704 aa8.64□□□□□ -1.03
PTPN12-213ENST00000519553 IFT22Q9H7X7 185 aa8.64□□□□□ -1.03
PTPN12-213ENST00000519553 ZMAT4Q9H898 229 aa8.64□□□□□ -1.03
PTPN12-213ENST00000519553 ZFP69BQ9UJL9 534 aa8.64□□□□□ -1.03
PTPN12-213ENST00000519553 SH3D21A4FU49 640 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 GOLGA6L22H0YM25 854 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 NUAK1O60285 661 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 CYP17A1P05093 508 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 COL6A1P12109 1028 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 SMAD3P84022 425 aaKnown RBP8.63□□□□□ -1.03
PTPN12-213ENST00000519553 NFKB2Q00653 900 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 OCRLQ01968 901 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 SMAD2Q15796 467 aaKnown RBP8.63□□□□□ -1.03
PTPN12-213ENST00000519553 LHFPL2Q6ZUX7 228 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 TTC1Q99614 292 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 AMNQ9BXJ7 453 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 IRF2BPLQ9H1B7 796 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 INCENPQ9NQS7 918 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 TOMM22Q9NS69 142 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 KCND1Q9NSA2 647 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 ARHGAP20Q9P2F6 1191 aa8.63□□□□□ -1.03
PTPN12-213ENST00000519553 ZEB2O60315 1214 aa8.62□□□□□ -1.03
PTPN12-213ENST00000519553 EPHA7Q15375 998 aa8.62□□□□□ -1.03
PTPN12-213ENST00000519553 TP53I13Q8NBR0 393 aaPredicted RBP8.62□□□□□ -1.03
PTPN12-213ENST00000519553 HIPK4Q8NE63 616 aa8.62□□□□□ -1.03
PTPN12-213ENST00000519553 WRNIP1Q96S55 665 aa8.62□□□□□ -1.03
PTPN12-213ENST00000519553 UCKL1Q9NWZ5 548 aa8.62□□□□□ -1.03
PTPN12-213ENST00000519553 APOBEC2Q9Y235 224 aaKnown RBP8.62□□□□□ -1.03
PTPN12-213ENST00000519553 PRAMEF22A3QJZ6 481 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 DBX1A6NMT0 343 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 ZNF28P17035 718 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 RPL13P26373 211 aaKnown RBP8.61□□□□□ -1.03
PTPN12-213ENST00000519553 CFPP27918 469 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 GLRBP48167 497 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 MLLT6P55198 1093 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-213ENST00000519553 STAT4Q14765 748 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 LCE3BQ5TA77 95 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 PRAMEF18Q5VWM3 479 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 ADGRG2Q8IZP9 1017 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 ZCCHC14Q8WYQ9 949 aaKnown RBP8.61□□□□□ -1.03
PTPN12-213ENST00000519553 CROTQ9UKG9 612 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 COL4A3BPQ9Y5P4 624 aa8.61□□□□□ -1.03
PTPN12-213ENST00000519553 A0A1B0GTL3 188 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 BRINP1O60477 761 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 PRLP01236 227 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 PHC1P78364 1004 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 TERF2Q15554 542 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 ATP13A4Q4VNC1 1196 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 LRSAM1Q6UWE0 723 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 DDX42Q86XP3 938 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTPN12-213ENST00000519553 LRRC56Q8IYG6 542 aaPredicted RBP8.6□□□□□ -1.03
PTPN12-213ENST00000519553 STPG3Q8N7X2 389 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 LINC01356Q8N9X3 169 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 ERCC4Q92889 916 aaPredicted RBP8.6□□□□□ -1.03
PTPN12-213ENST00000519553 TACO1Q9BSH4 297 aaKnown RBP8.6□□□□□ -1.03
PTPN12-213ENST00000519553 MS4A5Q9H3V2 200 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 PCDH12Q9NPG4 1184 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 GALNT8Q9NY28 637 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 ATP8A1Q9Y2Q0 1164 aa8.6□□□□□ -1.03
PTPN12-213ENST00000519553 IL13RA1P78552 427 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 ALDH6A1Q02252 535 aaKnown RBP8.59□□□□□ -1.03
PTPN12-213ENST00000519553 LRRC32Q14392 662 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 PTPROQ16827 1216 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 VMACQ2NL98 169 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 GPR158Q5T848 1215 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 C11orf74Q86VG3 221 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 TMEM151BQ8IW70 566 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 SLC5A5Q92911 643 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 TOX2Q96NM4 488 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 FOXB1Q99853 325 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 NTMQ9P121 344 aa8.59□□□□□ -1.03
PTPN12-213ENST00000519553 GPR39O43194 453 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 KNG1P01042 644 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 STILQ15468 1287 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 TCERG1LQ5VWI1 586 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 KANK2Q63ZY3 851 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 PASD1Q8IV76 773 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 ZZZ3Q8IYH5 903 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 RTF1Q92541 710 aaKnown RBP8.58□□□□□ -1.04
PTPN12-213ENST00000519553 SCYL1Q96KG9 808 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 BTBD2Q9BX70 525 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 BRINP2Q9C0B6 783 aa8.58□□□□□ -1.04
PTPN12-213ENST00000519553 UBA6A0AVT1 1052 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms