RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	YBX2	Q9Y2T7	364 aa	Known RBP	27.33	■■□□□ 1.97
CNOT7-204	ENST00000518885	CTDNEP1	O95476	244 aa		27.32	■■□□□ 1.96
CNOT7-204	ENST00000518885	NPY5R	Q15761	445 aa		27.32	■■□□□ 1.96
CNOT7-204	ENST00000518885	RUFY4	Q6ZNE9	571 aa		27.32	■■□□□ 1.96
CNOT7-204	ENST00000518885	RDM1	Q8NG50	284 aa		27.32	■■□□□ 1.96
CNOT7-204	ENST00000518885	DNAJB3	Q8WWF6	145 aa		27.32	■■□□□ 1.96
CNOT7-204	ENST00000518885	IFIH1	Q9BYX4	1025 aa	Known RBP	27.32	■■□□□ 1.96
CNOT7-204	ENST00000518885	DDX25	Q9UHL0	483 aa	Known RBP	27.32	■■□□□ 1.96
CNOT7-204	ENST00000518885	MAFB	Q9Y5Q3	323 aa	Predicted RBP	27.32	■■□□□ 1.96
CNOT7-204	ENST00000518885	SMIM35	A0A1B0GVV1	85 aa		27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	KRT2	P35908	639 aa		27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	MRPS6	P82932	125 aa	Known RBP	27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	FAM43B	Q6ZT52	329 aa	Predicted RBP	27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	NEK8	Q86SG6	692 aa		27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	USP38	Q8NB14	1042 aa		27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	ZSCAN31	Q96LW9	406 aa	Predicted RBP	27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	UIMC1	Q96RL1	719 aa		27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	DISC1	Q9NRI5	854 aa		27.31	■■□□□ 1.96
CNOT7-204	ENST00000518885	CA3	P07451	260 aa		27.3	■■□□□ 1.96
CNOT7-204	ENST00000518885	INF2	Q27J81	1249 aa		27.3	■■□□□ 1.96
CNOT7-204	ENST00000518885	LETM2	Q2VYF4	491 aa		27.3	■■□□□ 1.96
CNOT7-204	ENST00000518885	MTHFD1L	Q6UB35	978 aa		27.3	■■□□□ 1.96
CNOT7-204	ENST00000518885	NSUN7	Q8NE18	718 aa	Known RBP	27.3	■■□□□ 1.96
CNOT7-204	ENST00000518885	RAD9A	Q99638	391 aa		27.3	■■□□□ 1.96
CNOT7-204	ENST00000518885	FAM49A	Q9H0Q0	323 aa	Predicted RBP	27.3	■■□□□ 1.96
CNOT7-204	ENST00000518885	GABBR1	Q9UBS5	961 aa		27.3	■■□□□ 1.96
CNOT7-204	ENST00000518885	GJB5	O95377	273 aa		27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	TDP2	O95551	362 aa		27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	PPP4R3A	Q6IN85	833 aa		27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	SLC17A8	Q8NDX2	589 aa		27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	MAFA	Q8NHW3	353 aa	Predicted RBP	27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	MBOAT7	Q96N66	472 aa		27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	SH2B1	Q9NRF2	756 aa	Predicted RBP	27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	NRBP2	Q9NSY0	501 aa		27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	SQOR	Q9Y6N5	450 aa		27.29	■■□□□ 1.96
CNOT7-204	ENST00000518885	COL6A3	P12111	3177 aa		27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	MARCH6	O60337	910 aa		27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	LARGE1	O95461	756 aa		27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	CHRNA1	P02708	482 aa		27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	DEFB103A	P81534	67 aa		27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	FAM20A	Q96MK3	541 aa		27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	LLPH	Q9BRT6	129 aa	Known RBP	27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	PRDM12	Q9H4Q4	367 aa		27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	CDY2A	Q9Y6F7	541 aa		27.28	■■□□□ 1.96
CNOT7-204	ENST00000518885	IGSF9B	Q9UPX0	1349 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	CHMP2A	O43633	222 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	FDPS	P14324	419 aa	Known RBP	27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	MYOG	P15173	224 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	KLRC1	P26715	233 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	RBM25	P49756	843 aa	Known RBP	27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	MGAT3	Q09327	533 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	SAFB	Q15424	915 aa	Known RBP eCLIP	27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	TSHZ1	Q6ZSZ6	1077 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	PIK3AP1	Q6ZUJ8	805 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	MIER3	Q7Z3K6	550 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	MYOCD	Q8IZQ8	938 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	TET1	Q8NFU7	2136 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	TRAPPC12	Q8WVT3	735 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	INSL6	Q9Y581	213 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	TRPV2	Q9Y5S1	764 aa		27.27	■■□□□ 1.96
CNOT7-204	ENST00000518885	MAGEB2	O15479	319 aa		27.26	■■□□□ 1.95
CNOT7-204	ENST00000518885	CCNT1	O60563	726 aa	Known RBP	27.26	■■□□□ 1.95
CNOT7-204	ENST00000518885	PSMD10	O75832	226 aa		27.26	■■□□□ 1.95
CNOT7-204	ENST00000518885	GHR	P10912	638 aa		27.26	■■□□□ 1.95
CNOT7-204	ENST00000518885	ODR4	Q5SWX8	454 aa		27.26	■■□□□ 1.95
CNOT7-204	ENST00000518885	UNC45A	Q9H3U1	944 aa		27.26	■■□□□ 1.95
CNOT7-204	ENST00000518885	GBF1	Q92538	1859 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	CDH23	Q9H251	3354 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	TBX3	O15119	743 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	EDIL3	O43854	480 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	BAG4	O95429	457 aa	Known RBP	27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	MMP1	P03956	469 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	ZNF710	Q8N1W2	664 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	ETNPPL	Q8TBG4	499 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	FTHL17	Q9BXU8	183 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	CHD9	Q3L8U1	2897 aa		27.25	■■□□□ 1.95
CNOT7-204	ENST00000518885	ST18	O60284	1047 aa		27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	DKC1	O60832	514 aa	Known RBP eCLIP	27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	OAT	P04181	439 aa		27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	TMOD1	P28289	359 aa		27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	HMGN5	P82970	282 aa	Known RBP	27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	LPIN1	Q14693	890 aa		27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	RABEP1	Q15276	862 aa		27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	TCTN1	Q2MV58	587 aa		27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	FBXO47	Q5MNV8	452 aa		27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	CELF4	Q9BZC1	486 aa	Known RBP	27.24	■■□□□ 1.95
CNOT7-204	ENST00000518885	KDM3A	Q9Y4C1	1321 aa		27.23	■■□□□ 1.95
CNOT7-204	ENST00000518885	ATP4A	P20648	1035 aa		27.23	■■□□□ 1.95
CNOT7-204	ENST00000518885	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	27.23	■■□□□ 1.95
CNOT7-204	ENST00000518885	SLFN12	Q8IYM2	578 aa		27.23	■■□□□ 1.95
CNOT7-204	ENST00000518885	OXER1	Q8TDS5	423 aa		27.23	■■□□□ 1.95
CNOT7-204	ENST00000518885	GJB4	Q9NTQ9	266 aa		27.23	■■□□□ 1.95
CNOT7-204	ENST00000518885	JAK2	O60674	1132 aa		27.22	■■□□□ 1.95
CNOT7-204	ENST00000518885	PRKCE	Q02156	737 aa		27.22	■■□□□ 1.95
CNOT7-204	ENST00000518885	TAP1	Q03518	808 aa		27.22	■■□□□ 1.95
CNOT7-204	ENST00000518885	MKRN4P	Q13434	485 aa	Predicted RBP	27.22	■■□□□ 1.95
CNOT7-204	ENST00000518885	CCDC83	Q8IWF9	413 aa		27.22	■■□□□ 1.95
CNOT7-204	ENST00000518885	DIS3L2	Q8IYB7	885 aa	Known RBP	27.22	■■□□□ 1.95
CNOT7-204	ENST00000518885	METTL13	Q8N6R0	699 aa		27.22	■■□□□ 1.95
CNOT7-204	ENST00000518885	MAP7D2	Q96T17	732 aa		27.22	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 929.8 ms