RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 SPOUT1Q5T280 376 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 RTN4RL1Q86UN2 441 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 FAM49AQ9H0Q0 323 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 NR2E1Q9Y466 385 aa13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 KDM3AQ9Y4C1 1321 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 GSTTP1A0A1W2PQM5 241 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 MAFGO15525 162 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 INSRRP14616 1297 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 SARSP49591 514 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 TROAPQ12815 778 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 TMEM184AQ6ZMB5 413 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 CYB5R4Q7L1T6 521 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 UBALD2Q8IYN6 164 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 NME8Q8N427 588 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 RASGRP4Q8TDF6 673 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 RIPOR3Q96MK2 946 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 OSBPL3Q9H4L5 887 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 AZI2Q9H6S1 392 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
TRAPPC9-203ENST00000517667 H0Y858 1186 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 MEIS2O14770 477 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 PER2O15055 1255 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 ATP9AO75110 1047 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 FGF18O76093 207 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 MTMR1Q13613 665 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 MTMR3Q13615 1198 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 WTAPQ15007 396 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 ODR4Q5SWX8 454 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 THNSL1Q8IYQ7 743 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 VN1R2Q8NFZ6 395 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 C1orf112Q9NSG2 853 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 LZTS1Q9Y250 596 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 PCDHGC5Q9Y5F6 944 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 PCDHA2Q9Y5H9 948 aa13.15□□□□□ -0.3
TRAPPC9-203ENST00000517667 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 NBL1P41271 181 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 TECP42680 631 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 GATMP50440 423 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 KRT76Q01546 638 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 TMEM62Q0P6H9 643 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 KCNC3Q14003 757 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 ERMP1Q7Z2K6 904 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 RALYLQ86SE5 291 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 TMEM260Q9NX78 707 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 SORCS3Q9UPU3 1222 aa13.14□□□□□ -0.31
TRAPPC9-203ENST00000517667 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 PRR23AA6NEV1 266 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 TBKBP1A7MCY6 615 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 FSCN2O14926 492 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 ITGB5P18084 799 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 LAG3P18627 525 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 KIF5BP33176 963 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 NFX1Q12986 1120 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 SLC24A5Q71RS6 500 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 PLPPR4Q7Z2D5 763 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 PLEKHM2Q8IWE5 1019 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 COLGALT1Q8NBJ5 622 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 KREMEN2Q8NCW0 462 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 CTCFLQ8NI51 663 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 NECTIN4Q96NY8 510 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 LZTS2Q9BRK4 669 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 S1PR5Q9H228 398 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 NGRNQ9NPE2 291 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 ENTPD7Q9NQZ7 604 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 RGS18Q9NS28 235 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 PUF60Q9UHX1 559 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 UBIAD1Q9Y5Z9 338 aa13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 RIF1Q5UIP0 2472 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-203ENST00000517667 SPDYE3A6NKU9 549 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 RPS6KA5O75582 802 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 PDGFBP01127 241 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 SLC26A2P50443 739 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 ERVFC1P60507 584 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 PLCB3Q01970 1234 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 PLPP4Q5VZY2 271 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 MCTP2Q6DN12 878 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
TRAPPC9-203ENST00000517667 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms