RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 C11orf16Q9NQ32 467 aa10.92□□□□□ -0.66
SPIDR-202ENST00000517619 CLDND1Q9NY35 253 aa10.92□□□□□ -0.66
SPIDR-202ENST00000517619 NAP1L2Q9ULW6 460 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-202ENST00000517619 HCN4Q9Y3Q4 1203 aa10.92□□□□□ -0.66
SPIDR-202ENST00000517619 TRPV2Q9Y5S1 764 aa10.92□□□□□ -0.66
SPIDR-202ENST00000517619 IGSF9BQ9UPX0 1349 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 POTEB3A0JP26 581 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 PI4K2BG5E9Z4 385 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 CCNE2O96020 404 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 RB1P06400 928 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 CDC27P30260 824 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 ZNF76P36508 570 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 SREBF1P36956 1147 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 CLK2P49760 499 aaKnown RBP10.91□□□□□ -0.66
SPIDR-202ENST00000517619 PAK2Q13177 524 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 COL19A1Q14993 1142 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 PUS10Q3MIT2 529 aaKnown RBP10.91□□□□□ -0.66
SPIDR-202ENST00000517619 POTEBQ6S5H4 581 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 CLP1Q92989 425 aaKnown RBP10.91□□□□□ -0.66
SPIDR-202ENST00000517619 ZNF689Q96CS4 500 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-202ENST00000517619 FAM122AQ96E09 287 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 FTHL17Q9BXU8 183 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 LMAN2LQ9H0V9 348 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 BARHL2Q9NY43 387 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 PADI3Q9ULW8 664 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 PCDHA2Q9Y5H9 948 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 MRPL42Q9Y6G3 142 aaKnown RBP10.91□□□□□ -0.66
SPIDR-202ENST00000517619 SQORQ9Y6N5 450 aa10.91□□□□□ -0.66
SPIDR-202ENST00000517619 SMIM35A0A1B0GVV1 85 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 FAM86B1E9PN63 330 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 MEIS1O00470 390 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 BACH1O14867 736 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 GPR37L1O60883 481 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 CDC45O75419 566 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 ATG7O95352 703 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 MMP1P03956 469 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 IBSPP21815 317 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-202ENST00000517619 SLC26A2P50443 739 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 FGD1P98174 961 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 KRT76Q01546 638 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 KRT32Q14532 448 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 TMEM266Q2M3C6 531 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 PAN2Q504Q3 1202 aaKnown RBP10.9□□□□□ -0.66
SPIDR-202ENST00000517619 JAKMIP3Q5VZ66 844 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 MTHFD1LQ6UB35 978 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-202ENST00000517619 RTN4RL1Q86UN2 441 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-202ENST00000517619 CCDC60Q8IWA6 550 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-202ENST00000517619 TEX2Q8IWB9 1127 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 CRIPAKQ8N1N5 446 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 UIMC1Q96RL1 719 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 CELF4Q9BZC1 486 aaKnown RBP10.9□□□□□ -0.66
SPIDR-202ENST00000517619 ALG13Q9NP73 1137 aaKnown RBP10.9□□□□□ -0.66
SPIDR-202ENST00000517619 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-202ENST00000517619 GINS2Q9Y248 185 aa10.9□□□□□ -0.66
SPIDR-202ENST00000517619 KDM3AQ9Y4C1 1321 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 IGLV3-22A0A075B6J6 115 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 IGKV6D-21A0A0A0MT36 114 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 TBX10O75333 385 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 HMGB1P09429 215 aaKnown RBP10.89□□□□□ -0.67
SPIDR-202ENST00000517619 SCG2P13521 617 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 CPA1P15085 419 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 LTBRP36941 435 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 GATMP50440 423 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 METAP2P50579 478 aaKnown RBP eCLIP10.89□□□□□ -0.67
SPIDR-202ENST00000517619 RCAN1P53805 252 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 ZP2Q05996 745 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 DLX2Q07687 328 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-202ENST00000517619 HYAL1Q12794 435 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 NFX1Q12986 1120 aaKnown RBP10.89□□□□□ -0.67
SPIDR-202ENST00000517619 CLUL1Q15846 466 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 PFKFB3Q16875 520 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-202ENST00000517619 TSGA10IPQ3SY00 556 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 ABHD15Q6UXT9 468 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 NIPA1Q7RTP0 329 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 PLA2G4DQ86XP0 818 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 NPAS4Q8IUM7 802 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 CMTR2Q8IYT2 770 aaKnown RBP10.89□□□□□ -0.67
SPIDR-202ENST00000517619 ATP8B4Q8TF62 1192 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 PLVAPQ9BX97 442 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 GLT8D2Q9H1C3 349 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 TMX1Q9H3N1 280 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 ZNF302Q9NR11 478 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 FAM50BQ9Y247 325 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 COL1A2P08123 1366 aa10.89□□□□□ -0.67
SPIDR-202ENST00000517619 IPO5O00410 1097 aaKnown RBP10.88□□□□□ -0.67
SPIDR-202ENST00000517619 ADAMTS3O15072 1205 aa10.88□□□□□ -0.67
SPIDR-202ENST00000517619 LINC01565O15544 149 aa10.88□□□□□ -0.67
SPIDR-202ENST00000517619 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
SPIDR-202ENST00000517619 NCK2O43639 380 aa10.88□□□□□ -0.67
SPIDR-202ENST00000517619 HBP1O60381 514 aa10.88□□□□□ -0.67
SPIDR-202ENST00000517619 RPS6KA5O75582 802 aa10.88□□□□□ -0.67
SPIDR-202ENST00000517619 ITGB1P05556 798 aa10.88□□□□□ -0.67
SPIDR-202ENST00000517619 STAG3L1P0CL83 205 aa10.88□□□□□ -0.67
SPIDR-202ENST00000517619 KLRC1P26715 233 aa10.88□□□□□ -0.67
SPIDR-202ENST00000517619 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPIDR-202ENST00000517619 ADD1P35611 737 aaKnown RBP10.88□□□□□ -0.67
SPIDR-202ENST00000517619 APOBRQ0VD83 1088 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms