RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 SLC5A4Q9NY91 659 aa17.3■□□□□ 0.36
TRPS1-206ENST00000517323 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
TRPS1-206ENST00000517323 NOP56O00567 594 aaKnown RBP17.29■□□□□ 0.36
TRPS1-206ENST00000517323 PSAPP07602 524 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 CHMP4BP1P59074 171 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 PRKCEQ02156 737 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 REM2Q8IYK8 340 aaPredicted RBP17.29■□□□□ 0.36
TRPS1-206ENST00000517323 REEP2Q9BRK0 252 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 MYH11P35749 1972 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 STBD1O95210 358 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 SFNP31947 248 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 PSMC5P62195 406 aa17.29■□□□□ 0.36
TRPS1-206ENST00000517323 SMAP1Q8IYB5 467 aaPredicted RBP17.29■□□□□ 0.36
TRPS1-206ENST00000517323 SYT2Q8N9I0 419 aaPredicted RBP17.29■□□□□ 0.36
TRPS1-206ENST00000517323 PYM1Q9BRP8 204 aaKnown RBP17.29■□□□□ 0.36
TRPS1-206ENST00000517323 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
TRPS1-206ENST00000517323 EYA4O95677 639 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 MYCP01106 439 aaPredicted RBP17.28■□□□□ 0.36
TRPS1-206ENST00000517323 CNGA1P29973 690 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 TNFAIP2Q03169 654 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 MORC3Q14149 939 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 KIF22Q14807 665 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 STX1AQ16623 288 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 KLHL10Q6JEL2 608 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 RINT1Q6NUQ1 792 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 MIS18BP1Q6P0N0 1132 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 TRMT44Q8IYL2 757 aaKnown RBP17.28■□□□□ 0.36
TRPS1-206ENST00000517323 C7orf25Q9BPX7 421 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 CUEDC2Q9H467 287 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 GPRC5CQ9NQ84 441 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 ZNF302Q9NR11 478 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 SEPT9Q9UHD8 586 aaPredicted RBP17.28■□□□□ 0.36
TRPS1-206ENST00000517323 DYNC1LI2O43237 492 aaPredicted RBP17.28■□□□□ 0.36
TRPS1-206ENST00000517323 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
TRPS1-206ENST00000517323 ATG7O95352 703 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 IGHA2P01877 340 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 KRT18P05783 430 aaKnown RBP17.28■□□□□ 0.36
TRPS1-206ENST00000517323 RARRES1P49788 294 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 NLRP12P59046 1061 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 STK4Q13043 487 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 LRRC41Q15345 812 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 HSP90AA4PQ58FG1 418 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 NACC1Q96RE7 527 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 CFHR5Q9BXR6 569 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 SLC39A2Q9NP94 309 aa17.28■□□□□ 0.36
TRPS1-206ENST00000517323 RBM47A0AV96 593 aaKnown RBP17.27■□□□□ 0.36
TRPS1-206ENST00000517323 SMC2O95347 1197 aa17.27■□□□□ 0.36
TRPS1-206ENST00000517323 BEX3Q00994 111 aa17.27■□□□□ 0.36
TRPS1-206ENST00000517323 GIT2Q14161 759 aa17.27■□□□□ 0.36
TRPS1-206ENST00000517323 XKR9Q5GH70 373 aa17.27■□□□□ 0.36
TRPS1-206ENST00000517323 TRAPPC12Q8WVT3 735 aa17.27■□□□□ 0.36
TRPS1-206ENST00000517323 SEPT1Q8WYJ6 367 aa17.27■□□□□ 0.36
TRPS1-206ENST00000517323 GLG1Q92896 1179 aa17.27■□□□□ 0.36
TRPS1-206ENST00000517323 CBX8Q9HC52 389 aa17.27■□□□□ 0.36
TRPS1-206ENST00000517323 IGSF9BQ9UPX0 1349 aa17.27■□□□□ 0.35
TRPS1-206ENST00000517323 CCND3P30281 292 aaPredicted RBP17.26■□□□□ 0.35
TRPS1-206ENST00000517323 STX17P56962 302 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 CACNB2Q08289 660 aaPredicted RBP17.26■□□□□ 0.35
TRPS1-206ENST00000517323 MTERF2Q49AM1 385 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 DUSP28Q4G0W2 176 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 ELOA2Q8IYF1 753 aaPredicted RBP17.26■□□□□ 0.35
TRPS1-206ENST00000517323 OR6J1Q8NGC5 347 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 MED15Q96RN5 788 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 SRRDQ9UH36 339 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 LOC102724159A0A0B4J2E5 919 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 ARHGEF35A5YM69 484 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 MYADML2A6NDP7 307 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 GOLGA6L3A6NEY3 463 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 GH1P01241 217 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
TRPS1-206ENST00000517323 ZNF165P49910 485 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 STAT5BP51692 787 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 PWP2Q15269 919 aaKnown RBP17.26■□□□□ 0.35
TRPS1-206ENST00000517323 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 C1orf186Q6ZWK4 172 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 DNAJC5GQ8N7S2 189 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 EEF2KMTQ96G04 330 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 IKZF4Q9H2S9 585 aa17.26■□□□□ 0.35
TRPS1-206ENST00000517323 MAFBQ9Y5Q3 323 aaPredicted RBP17.26■□□□□ 0.35
TRPS1-206ENST00000517323 IGKV6D-21A0A0A0MT36 114 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 COASYQ13057 564 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 KCNV1Q6PIU1 500 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 C4orf19Q8IY42 314 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 KIAA0895Q8NCT3 520 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
TRPS1-206ENST00000517323 GSDMAQ96QA5 445 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 RNPEPQ9H4A4 650 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 PANK4Q9NVE7 773 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 GNEQ9Y223 722 aaKnown RBP17.25■□□□□ 0.35
TRPS1-206ENST00000517323 FKTNO75072 461 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 PRKAR2AP13861 404 aaKnown RBP17.25■□□□□ 0.35
TRPS1-206ENST00000517323 CASP5P51878 434 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 TLK2Q86UE8 772 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 KSR1Q8IVT5 923 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 AOPEPQ8N6M6 819 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 NEK9Q8TD19 979 aa17.25■□□□□ 0.35
TRPS1-206ENST00000517323 ATP6V0A1Q93050 837 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms