RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MBTPS1Q14703 1052 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 LETM2Q2VYF4 491 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 MARCH8Q5T0T0 291 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 KRT40Q6A162 431 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 SWSAP1Q6NVH7 229 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 PDXDC2PQ6P474 469 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 B3GNT9Q6UX72 402 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 BBXQ8WY36 941 aaPredicted RBP14.44□□□□□ -0.1
CLCN3-210ENST00000515420 FAM167AQ96KS9 214 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 FAM20AQ96MK3 541 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 KCNMB3Q9NPA1 279 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 DISC1Q9NRI5 854 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 MTMR10Q9NXD2 777 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 ATP2A2P16615 1042 aaKnown RBP14.43□□□□□ -0.1
CLCN3-210ENST00000515420 MCM2P49736 904 aa14.43□□□□□ -0.1
CLCN3-210ENST00000515420 NR5A1Q13285 461 aa14.43□□□□□ -0.1
CLCN3-210ENST00000515420 ZNF484Q5JVG2 852 aa14.43□□□□□ -0.1
CLCN3-210ENST00000515420 DIS3L2Q8IYB7 885 aaKnown RBP14.43□□□□□ -0.1
CLCN3-210ENST00000515420 PBX4Q9BYU1 374 aa14.43□□□□□ -0.1
CLCN3-210ENST00000515420 SAMM50Q9Y512 469 aa14.43□□□□□ -0.1
CLCN3-210ENST00000515420 PCDHA2Q9Y5H9 948 aa14.43□□□□□ -0.1
CLCN3-210ENST00000515420 PTPRSQ13332 1948 aa14.43□□□□□ -0.1
CLCN3-210ENST00000515420 SMIM35A0A1B0GVV1 85 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 SLC37A4O43826 429 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 CCNT1O60563 726 aaKnown RBP14.42□□□□□ -0.1
CLCN3-210ENST00000515420 KCNJ6P48051 423 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 IKBKEQ14164 716 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 SAFBQ15424 915 aaKnown RBP eCLIP14.42□□□□□ -0.1
CLCN3-210ENST00000515420 PLEKHG4Q58EX7 1191 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 RUFY4Q6ZNE9 571 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 FAM43BQ6ZT52 329 aaPredicted RBP14.42□□□□□ -0.1
CLCN3-210ENST00000515420 Q7L0L9 218 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 NME8Q8N427 588 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 APBB2Q92870 758 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 C8orf76Q96K31 380 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 UNC45AQ9H3U1 944 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 MSRAQ9UJ68 235 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 CEP131Q9UPN4 1083 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 KIF3AQ9Y496 699 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 PCDHA11Q9Y5I1 949 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 SQORQ9Y6N5 450 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 EVPLQ92817 2033 aa14.42□□□□□ -0.1
CLCN3-210ENST00000515420 BTBD18B2RXH4 712 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 DTNBO60941 627 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 CTSHP09668 335 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 ATP4AP20648 1035 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 WDR5P61964 334 aaKnown RBP14.41□□□□□ -0.1
CLCN3-210ENST00000515420 IGBP1P78318 339 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 MGAT3Q09327 533 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 PPP2R5CQ13362 524 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 EARS2Q5JPH6 523 aaKnown RBP14.41□□□□□ -0.1
CLCN3-210ENST00000515420 MTHFD1LQ6UB35 978 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 MIER3Q7Z3K6 550 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 CKAP2LQ8IYA6 745 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 SLFN12Q8IYM2 578 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 FAM184AQ8NB25 1140 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 FBXO18Q8NFZ0 1043 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 TIFAQ96CG3 184 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 UIMC1Q96RL1 719 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 FOXP1Q9H334 677 aaPredicted RBP14.41□□□□□ -0.1
CLCN3-210ENST00000515420 SEMA6BQ9H3T3 888 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 GABBR1Q9UBS5 961 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 KDM3AQ9Y4C1 1321 aa14.41□□□□□ -0.1
CLCN3-210ENST00000515420 GRXCR1A8MXD5 290 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 ZBTB42B2RXF5 422 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 M0QZ92 97 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 CHRNA1P02708 482 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 MRPS6P82932 125 aaKnown RBP14.4□□□□□ -0.1
CLCN3-210ENST00000515420 ORC2Q13416 577 aaPredicted RBP14.4□□□□□ -0.1
CLCN3-210ENST00000515420 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
CLCN3-210ENST00000515420 IER5Q5VY09 327 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 USP38Q8NB14 1042 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 DBF4BQ8NFT6 615 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 DNAJB3Q8WWF6 145 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 SEPT8Q92599 483 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 BACH2Q9BYV9 841 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 TTYH1Q9H313 450 aaPredicted RBP14.4□□□□□ -0.1
CLCN3-210ENST00000515420 NRBP2Q9NSY0 501 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 LOXHD1Q8IVV2 1947 aa14.4□□□□□ -0.1
CLCN3-210ENST00000515420 FAM205CA6NFA0 338 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 MAGEB2O15479 319 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 CHMP2AO43633 222 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 ZNF862O60290 1169 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 BAG4O95429 457 aaKnown RBP14.39□□□□□ -0.11
CLCN3-210ENST00000515420 C22orf31O95567 290 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 OATP04181 439 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 KLRC1P26715 233 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 PRKCEQ02156 737 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 HERC6Q8IVU3 1022 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 ZNF710Q8N1W2 664 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 TRAPPC12Q8WVT3 735 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 HAS1Q92839 578 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 GJA10Q969M2 543 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 TMX3Q96JJ7 454 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 IFIH1Q9BYX4 1025 aaKnown RBP14.39□□□□□ -0.11
CLCN3-210ENST00000515420 ZNF576Q9H609 170 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 VAV3Q9UKW4 847 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 STXBP5LQ9Y2K9 1186 aa14.39□□□□□ -0.11
CLCN3-210ENST00000515420 DKC1O60832 514 aaKnown RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms