RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 CCDC60Q8IWA6 550 aaPredicted RBP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 MYOCDQ8IZQ8 938 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 CSGALNACT2Q8N6G5 542 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 GTF3C2Q8WUA4 911 aaPredicted RBP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 TRIM47Q96LD4 638 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 SENP7Q9BQF6 1050 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 FAM155AB1AL88 458 aaPredicted RBP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 MYBP10242 640 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 CDC25BP30305 580 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 RARRES1P49788 294 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 GPR142Q7Z601 462 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 C4orf19Q8IY42 314 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 GUF1Q8N442 669 aaKnown RBP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 KCTD17Q8N5Z5 321 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 MYCT1Q8N699 235 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 NEK9Q8TD19 979 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 SCFD1Q8WVM8 642 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 COPS5Q92905 334 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 VPS16Q9H269 839 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 PLXNA1Q9UIW2 1896 aa10.15□□□□□ -0.79
CPNE4-213ENST00000515418 PLXNB2O15031 1838 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 MANSC4A6NHS7 340 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 KCNJ18B7U540 433 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 BACH1O14867 736 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 TBCAO75347 108 aaKnown RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 PRPF6O94906 941 aaKnown RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 FAM13AO94988 1023 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 STBD1O95210 358 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 GGPS1O95749 300 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 PSAPP07602 524 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 NMT1P30419 496 aaKnown RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 HOXD13P35453 343 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 KCNA1Q09470 495 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 KCNJ12Q14500 433 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 NR1I3Q14994 352 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 KRT31Q15323 416 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 TAF1CQ15572 869 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 ZNF792Q3KQV3 632 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 ZC2HC1CQ53FD0 456 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 COBLL1Q53SF7 1204 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 XKR9Q5GH70 373 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 TCP11X2Q5H9J9 407 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 TMC6Q7Z403 805 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 DPP9Q86TI2 863 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 KSR1Q8IVT5 923 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 SMAP1Q8IYB5 467 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 DAW1Q8N136 415 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 IKZF4Q9H2S9 585 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 MRPL44Q9H9J2 332 aaKnown RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 DDX41Q9UJV9 622 aaKnown RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 DBR1Q9UK59 544 aaKnown RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 COL4A3BPQ9Y5P4 624 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 IVNS1ABPQ9Y6Y0 642 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 SYNGAP1Q96PV0 1343 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 GSTTP1A0A1W2PQM5 241 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 STRNO43815 780 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 USO1O60763 962 aaKnown RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 HIP1RO75146 1068 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 FARP2O94887 1054 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 LYPLA2O95372 231 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 SLC10A3P09131 477 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 ATP4AP20648 1035 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 SOX10P56693 466 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 LRMPQ12912 555 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 FAM110CQ1W6H9 321 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 ARMCX2Q7L311 632 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 IFNL1Q8IU54 200 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 GTPBP4Q9BZE4 634 aaKnown RBP10.14□□□□□ -0.79
CPNE4-213ENST00000515418 KCNF1Q9H3M0 494 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 GPRC5CQ9NQ84 441 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 TAB2Q9NYJ8 693 aa10.14□□□□□ -0.79
CPNE4-213ENST00000515418 BICDL2A1A5D9 508 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 LRRC10BA6NIK2 292 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 B4DLN1 442 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 ATG7O95352 703 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 SUPT20HL2P0C7V6 817 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 TGFB3P10600 412 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 GOLGA8FQ08AF8 430 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 GOLGA8DPQ0D2H9 430 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 MAPK7Q13164 816 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 HSDL1Q3SXM5 330 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 HS1BP3Q53T59 392 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 GJC2Q5T442 439 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-213ENST00000515418 MIS18BP1Q6P0N0 1132 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-213ENST00000515418 PLEKHH3Q7Z736 793 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 SMC1BQ8NDV3 1235 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 RDM1Q8NG50 284 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
CPNE4-213ENST00000515418 KCTD10Q9H3F6 313 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 MLXIPQ9HAP2 919 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 PARVGQ9HBI0 331 aa10.13□□□□□ -0.79
CPNE4-213ENST00000515418 LIMA1Q9UHB6 759 aaKnown RBP10.13□□□□□ -0.79
CPNE4-213ENST00000515418 A0A1B0GTH6 734 aa10.12□□□□□ -0.79
CPNE4-213ENST00000515418 ASB14A6NK59 587 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms