RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ZKSCAN4Q969J2 545 aaPredicted RBP15.57■□□□□ 0.08
TRIO-222ENST00000515144 ATP6V1E2Q96A05 226 aa15.57■□□□□ 0.08
TRIO-222ENST00000515144 POLR3EQ9NVU0 708 aa15.57■□□□□ 0.08
TRIO-222ENST00000515144 LARGE1O95461 756 aa15.57■□□□□ 0.08
TRIO-222ENST00000515144 ARMCX2Q7L311 632 aa15.57■□□□□ 0.08
TRIO-222ENST00000515144 RNF217Q8TC41 542 aa15.57■□□□□ 0.08
TRIO-222ENST00000515144 PIN4Q9Y237 131 aaKnown RBP15.57■□□□□ 0.08
TRIO-222ENST00000515144 SAR1BQ9Y6B6 198 aa15.57■□□□□ 0.08
TRIO-222ENST00000515144 PHBP35232 272 aa15.57■□□□□ 0.08
TRIO-222ENST00000515144 LRRC7Q96NW7 1537 aa15.57■□□□□ 0.08
TRIO-222ENST00000515144 POTEB3A0JP26 581 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 POTECB2RU33 542 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 S100BP04271 92 aaPredicted RBP15.56■□□□□ 0.08
TRIO-222ENST00000515144 ELF2Q15723 593 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 ZNF699Q32M78 642 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 POTEBQ6S5H4 581 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 NGRNQ9NPE2 291 aaKnown RBP15.56■□□□□ 0.08
TRIO-222ENST00000515144 NBPF26B4DH59 902 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 PRPF3O43395 683 aaKnown RBP15.56■□□□□ 0.08
TRIO-222ENST00000515144 YWHAGP61981 247 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRIO-222ENST00000515144 TSPY1Q01534 308 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 NBPF10Q6P3W6 841 aaKnown RBP15.56■□□□□ 0.08
TRIO-222ENST00000515144 NBPF15Q8N660 670 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 YAF2Q8IY57 180 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 MAIP1Q8WWC4 291 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 EFCC1Q9HA90 598 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 PRPSAP2O60256 369 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 CIITAP33076 1130 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 P2RX5Q93086 422 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 CEP170BQ9Y4F5 1589 aaPredicted RBP15.56■□□□□ 0.08
TRIO-222ENST00000515144 GPC3P51654 580 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 NBPF11Q86T75 865 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 SAAL1Q96ER3 474 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 STAP2Q9UGK3 403 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 SSH2Q76I76 1423 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 SOX5P35711 763 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 PPP6R3Q5H9R7 873 aaPredicted RBP15.56■□□□□ 0.08
TRIO-222ENST00000515144 PGBD3Q8N328 593 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 EXT2Q93063 718 aa15.56■□□□□ 0.08
TRIO-222ENST00000515144 KRT1P04264 644 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 SPATA1Q5VX52 437 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 POLR3FQ9H1D9 316 aaPredicted RBP15.55■□□□□ 0.08
TRIO-222ENST00000515144 IPO5O00410 1097 aaKnown RBP15.55■□□□□ 0.08
TRIO-222ENST00000515144 ARL4AP40617 200 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 JAK3P52333 1124 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 HUS1O60921 280 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 PMLP29590 882 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 DCAF4L1Q3SXM0 396 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 ZNF658Q5TYW1 1059 aaPredicted RBP15.55■□□□□ 0.08
TRIO-222ENST00000515144 ZNF449Q6P9G9 518 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 SIRT2Q8IXJ6 389 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 TTC25Q96NG3 672 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 PCDHA5Q9Y5H7 936 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 WDR64B1ANS9 1081 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 MCF2LO15068 1137 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 RRP9O43818 475 aaKnown RBP15.55■□□□□ 0.08
TRIO-222ENST00000515144 GRIK1P39086 918 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 KRT71Q3SY84 523 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 CCDC62Q6P9F0 684 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 FBXO40Q9UH90 709 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 IRF1P10914 325 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 ATN1P54259 1190 aaPredicted RBP15.55■□□□□ 0.08
TRIO-222ENST00000515144 KIF12Q96FN5 646 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 KAT6AQ92794 2004 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 MXI1P50539 228 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 BASP1P80723 227 aaKnown RBP15.55■□□□□ 0.08
TRIO-222ENST00000515144 SZRD1Q7Z422 152 aa15.55■□□□□ 0.08
TRIO-222ENST00000515144 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.55■□□□□ 0.08
TRIO-222ENST00000515144 TADA2AO75478 443 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 ADORA2BP29275 332 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 CASP14P31944 242 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 CCDC157Q569K6 752 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 NPHP3-ACAD11A0A0J9YXS1 232 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 NUMBP49757 651 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 RBL2Q08999 1139 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 IQCB1Q15051 598 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 STRIP1Q5VSL9 837 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 GRK7Q8WTQ7 553 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 DEFB129Q9H1M3 183 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 CALCOCO1Q9P1Z2 691 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 SPATA31A5Q5VU36 1347 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 SPATA31A7Q8IWB4 1347 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 ARHGAP6O43182 974 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 DDX53Q86TM3 631 aaKnown RBP15.54■□□□□ 0.08
TRIO-222ENST00000515144 CCDC170Q8IYT3 715 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 GPT2Q8TD30 523 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 MAP7D3Q8IWC1 876 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 FEZ2Q9UHY8 353 aaPredicted RBP15.54■□□□□ 0.08
TRIO-222ENST00000515144 PPP6R2O75170 966 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 BPIFB4P59827 614 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 TRIM58Q8NG06 486 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 AFAP1L1Q8TED9 768 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 PSPC1Q8WXF1 523 aaKnown RBP15.54■□□□□ 0.08
TRIO-222ENST00000515144 MMTAG2Q9BU76 263 aaKnown RBP15.54■□□□□ 0.08
TRIO-222ENST00000515144 HPCAL4Q9UM19 191 aa15.54■□□□□ 0.08
TRIO-222ENST00000515144 ARHGEF37A1IGU5 675 aa15.53■□□□□ 0.08
TRIO-222ENST00000515144 RARBP10826 455 aa15.53■□□□□ 0.08
TRIO-222ENST00000515144 LCP1P13796 627 aa15.53■□□□□ 0.08
TRIO-222ENST00000515144 QRICH1Q2TAL8 776 aa15.53■□□□□ 0.08
TRIO-222ENST00000515144 DPCR1Q3MIW9 517 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms