RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 TRPC6Q9Y210 931 aa26.16■■□□□ 1.78
SMAD1-214ENST00000514831 PCDHA2Q9Y5H9 948 aa26.16■■□□□ 1.78
SMAD1-214ENST00000514831 KDM3AQ9Y4C1 1321 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 STXBP3O00186 592 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 EYA4O95677 639 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 STAG3L1P0CL83 205 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 LIFRP42702 1097 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 MRE11P49959 708 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 PAK2Q13177 524 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 SPPL3Q8TCT6 385 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 KCNH7Q9NS40 1196 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 PADI3Q9ULW8 664 aa26.15■■□□□ 1.78
SMAD1-214ENST00000514831 NFASCO94856 1347 aa26.14■■□□□ 1.78
SMAD1-214ENST00000514831 SCG2P13521 617 aa26.14■■□□□ 1.78
SMAD1-214ENST00000514831 PAN2Q504Q3 1202 aaKnown RBP26.14■■□□□ 1.78
SMAD1-214ENST00000514831 TMTC3Q6ZXV5 915 aa26.14■■□□□ 1.78
SMAD1-214ENST00000514831 ADGRD2Q7Z7M1 963 aa26.14■■□□□ 1.78
SMAD1-214ENST00000514831 EFHBQ8N7U6 833 aa26.14■■□□□ 1.78
SMAD1-214ENST00000514831 KLHL23Q8NBE8 558 aa26.14■■□□□ 1.78
SMAD1-214ENST00000514831 MFSD14AQ96MC6 490 aa26.14■■□□□ 1.78
SMAD1-214ENST00000514831 FNDC1Q4ZHG4 1894 aaPredicted RBP26.14■■□□□ 1.78
SMAD1-214ENST00000514831 hCG_1642624A0A1W2PR95 340 aa26.13■■□□□ 1.77
SMAD1-214ENST00000514831 TMEM62Q0P6H9 643 aa26.13■■□□□ 1.77
SMAD1-214ENST00000514831 PLCB4Q15147 1175 aa26.13■■□□□ 1.77
SMAD1-214ENST00000514831 PLPPR4Q7Z2D5 763 aa26.13■■□□□ 1.77
SMAD1-214ENST00000514831 SMRP1Q8NCR6 262 aa26.13■■□□□ 1.77
SMAD1-214ENST00000514831 TRAPPC12Q8WVT3 735 aa26.13■■□□□ 1.77
SMAD1-214ENST00000514831 MXRA8Q9BRK3 442 aa26.13■■□□□ 1.77
SMAD1-214ENST00000514831 CELF4Q9BZC1 486 aaKnown RBP26.13■■□□□ 1.77
SMAD1-214ENST00000514831 CLEC1BQ9P126 229 aa26.13■■□□□ 1.77
SMAD1-214ENST00000514831 SMIM35A0A1B0GVV1 85 aa26.12■■□□□ 1.77
SMAD1-214ENST00000514831 ACTR2P61160 394 aa26.12■■□□□ 1.77
SMAD1-214ENST00000514831 COASYQ13057 564 aa26.12■■□□□ 1.77
SMAD1-214ENST00000514831 COL9A3Q14050 684 aaPredicted RBP26.12■■□□□ 1.77
SMAD1-214ENST00000514831 HEATR3Q7Z4Q2 680 aa26.12■■□□□ 1.77
SMAD1-214ENST00000514831 POF1BQ8WVV4 589 aa26.12■■□□□ 1.77
SMAD1-214ENST00000514831 SDF4Q9BRK5 362 aa26.12■■□□□ 1.77
SMAD1-214ENST00000514831 SLC12A7Q9Y666 1083 aa26.12■■□□□ 1.77
SMAD1-214ENST00000514831 FAM43BQ6ZT52 329 aaPredicted RBP26.11■■□□□ 1.77
SMAD1-214ENST00000514831 TEX2Q8IWB9 1127 aa26.11■■□□□ 1.77
SMAD1-214ENST00000514831 NME8Q8N427 588 aa26.11■■□□□ 1.77
SMAD1-214ENST00000514831 EDAQ92838 391 aa26.11■■□□□ 1.77
SMAD1-214ENST00000514831 TMX1Q9H3N1 280 aa26.11■■□□□ 1.77
SMAD1-214ENST00000514831 GLP2RO95838 553 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 SLC26A2P50443 739 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 STAT5BP51692 787 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 KRT76Q01546 638 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 RAB11FIP4Q86YS3 637 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 CCDC82Q8N4S0 544 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 FANCBQ8NB91 859 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 CYP2W1Q8TAV3 490 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 LRFN2Q9ULH4 789 aa26.1■■□□□ 1.77
SMAD1-214ENST00000514831 NRIP1P48552 1158 aa26.09■■□□□ 1.77
SMAD1-214ENST00000514831 SARSP49591 514 aaKnown RBP26.09■■□□□ 1.77
SMAD1-214ENST00000514831 GATMP50440 423 aa26.09■■□□□ 1.77
SMAD1-214ENST00000514831 MTHFD1LQ6UB35 978 aa26.09■■□□□ 1.77
SMAD1-214ENST00000514831 MICU3Q86XE3 530 aa26.09■■□□□ 1.77
SMAD1-214ENST00000514831 LSG1Q9H089 658 aaKnown RBP26.09■■□□□ 1.77
SMAD1-214ENST00000514831 CNTNAP5Q8WYK1 1306 aa26.09■■□□□ 1.77
SMAD1-214ENST00000514831 ATG7O95352 703 aa26.08■■□□□ 1.77
SMAD1-214ENST00000514831 ITGB3BPQ13352 177 aaPredicted RBP26.08■■□□□ 1.77
SMAD1-214ENST00000514831 WWC2Q6AWC2 1192 aa26.08■■□□□ 1.77
SMAD1-214ENST00000514831 PPP1R18Q6NYC8 613 aa26.08■■□□□ 1.77
SMAD1-214ENST00000514831 BMP8AQ7Z5Y6 402 aa26.08■■□□□ 1.77
SMAD1-214ENST00000514831 SGMS1Q86VZ5 419 aa26.08■■□□□ 1.77
SMAD1-214ENST00000514831 AGO4Q9HCK5 861 aaKnown RBP26.08■■□□□ 1.77
SMAD1-214ENST00000514831 BARX2Q9UMQ3 279 aaPredicted RBP26.08■■□□□ 1.77
SMAD1-214ENST00000514831 IGKV6D-21A0A0A0MT36 114 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 LOC730098B7Z3J9 87 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 SLC27A2O14975 620 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 ARP10275 920 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 UBE3AQ05086 875 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 TMEM266Q2M3C6 531 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 CEP55Q53EZ4 464 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 ERVK-5Q9HDB9 667 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 RIC8AQ9NPQ8 531 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 EVPLQ92817 2033 aa26.07■■□□□ 1.76
SMAD1-214ENST00000514831 KMT2EQ8IZD2 1858 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 WDFY4Q6ZS81 3184 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 FOSP01100 380 aaPredicted RBP26.06■■□□□ 1.76
SMAD1-214ENST00000514831 NFX1Q12986 1120 aaKnown RBP26.06■■□□□ 1.76
SMAD1-214ENST00000514831 CBX2Q14781 532 aaPredicted RBP26.06■■□□□ 1.76
SMAD1-214ENST00000514831 TYW1BQ6NUM6 668 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 RBM23Q86U06 439 aaKnown RBP26.06■■□□□ 1.76
SMAD1-214ENST00000514831 PGBD1Q96JS3 809 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 LRRC2Q9BYS8 371 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 ANO3Q9BYT9 981 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 RNF216Q9NWF9 866 aaPredicted RBP26.06■■□□□ 1.76
SMAD1-214ENST00000514831 USP15Q9Y4E8 981 aaPredicted RBP26.06■■□□□ 1.76
SMAD1-214ENST00000514831 PCDHB7Q9Y5E2 793 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 PCDHGC5Q9Y5F6 944 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 COL1A2P08123 1366 aa26.06■■□□□ 1.76
SMAD1-214ENST00000514831 TRIOO75962 3097 aa26.05■■□□□ 1.76
SMAD1-214ENST00000514831 FSD2A1L4K1 749 aa26.05■■□□□ 1.76
SMAD1-214ENST00000514831 HBP1O60381 514 aa26.05■■□□□ 1.76
SMAD1-214ENST00000514831 MGEA5O60502 916 aa26.05■■□□□ 1.76
SMAD1-214ENST00000514831 NAPAP54920 295 aa26.05■■□□□ 1.76
SMAD1-214ENST00000514831 TRIM67Q6ZTA4 783 aa26.05■■□□□ 1.76
SMAD1-214ENST00000514831 YTHDC1Q96MU7 727 aaKnown RBP26.05■■□□□ 1.76
SMAD1-214ENST00000514831 C1orf112Q9NSG2 853 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms