RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	LRRN4CL	Q8ND94	238 aa		7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	WDR66	Q8TBY9	1149 aa		7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	TBC1D22A	Q8WUA7	517 aa		7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	UBP1	Q9NZI7	540 aa		7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	HMG20B	Q9P0W2	317 aa		7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	PCDHB14	Q9Y5E9	798 aa		7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	PDS5A	Q29RF7	1337 aa	Known RBP	7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	ZNF646	O15015	1829 aa	Predicted RBP	7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	SCN4A	P35499	1836 aa		7.94	□□□□□ -1.14
HIPK1-210	ENST00000514621	ATE1	O95260	518 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	MCAM	P43121	646 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	CRK	P46108	304 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	MMP14	P50281	582 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	FANCC	Q00597	558 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	NUCB1	Q02818	461 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	SEZ6	Q53EL9	994 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	ATG4D	Q86TL0	474 aa	Predicted RBP	7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	CHD1L	Q86WJ1	897 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	LDHD	Q86WU2	507 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	SPATA5	Q8NB90	893 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	UBE2F	Q969M7	185 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	SPON2	Q9BUD6	331 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	NT5C1A	Q9BXI3	368 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	ATP13A1	Q9HD20	1204 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	MYOZ2	Q9NPC6	264 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	HDAC9	Q9UKV0	1011 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	KCNH3	Q9ULD8	1083 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	PSME4	Q14997	1843 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	SALL1	Q9NSC2	1324 aa		7.93	□□□□□ -1.14
HIPK1-210	ENST00000514621	MYH13	Q9UKX3	1938 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	RBAK-RBAKDN	I3L0D1	243 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	CHMP4BP1	P59074	171 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	USP48	Q86UV5	1035 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	REXO1	Q8N1G1	1221 aa	Known RBP	7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	SMC1B	Q8NDV3	1235 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	OTUD7A	Q8TE49	926 aa	Predicted RBP	7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	RNF141	Q8WVD5	230 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	NKD1	Q969G9	470 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	RNF34	Q969K3	372 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	ZBED3	Q96IU2	234 aa	Predicted RBP	7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621		Q96M66	194 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	TRIT1	Q9H3H1	467 aa	Known RBP	7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	EHMT1	Q9H9B1	1298 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	PRDM7	Q9NQW5	492 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	ZSWIM5	Q9P217	1185 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	PGAP2	Q9UHJ9	254 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	SUGT1	Q9Y2Z0	365 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	PCDHAC2	Q9Y5I4	1007 aa		7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	ASTN2	O75129	1339 aa	Predicted RBP	7.92	□□□□□ -1.14
HIPK1-210	ENST00000514621	SLC22A31	A6NKX4	558 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	WNT10B	O00744	389 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	DNAJA2	O60884	412 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	PRDX5	P30044	214 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	GBP1	P32455	592 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	MCM4	P33991	863 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	ZNF165	P49910	485 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	HDLBP	Q00341	1268 aa	Known RBP	7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	FSTL1	Q12841	308 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	DLGAP5	Q15398	846 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	NBPF9	Q3BBW0	867 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	CFAP100	Q494V2	611 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	OGFOD2	Q6N063	350 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	ZGPAT	Q8N5A5	531 aa	Known RBP	7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	PRMT6	Q96LA8	375 aa	Predicted RBP	7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	KIF2C	Q99661	725 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	MRI	Q9BWK5	157 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	CARS2	Q9HA77	564 aa	Known RBP	7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	GMIP	Q9P107	970 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	ABCF2	Q9UG63	623 aa		7.91	□□□□□ -1.14
HIPK1-210	ENST00000514621	ADAMTSL1	Q8N6G6	1762 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	MAST3	O60307	1309 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	AOX1	Q06278	1338 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	SCAMP3	O14828	347 aa	Known RBP	7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	RAG1	P15918	1043 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	ATP5J	P18859	108 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	RBM5	P52756	815 aa	Known RBP eCLIP	7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	C1QTNF8	P60827	252 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	ARSH	Q5FYA8	562 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	TSHZ3	Q63HK5	1081 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	SPTY2D1	Q68D10	685 aa	Predicted RBP	7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	TMPRSS7	Q7RTY8	843 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	CNTROB	Q8N137	903 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	ZNF384	Q8TF68	577 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	TEKT1	Q969V4	418 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	KREMEN1	Q96MU8	473 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	ASPN	Q9BXN1	380 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	PIH1D3	Q9NQM4	214 aa	Known RBP	7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	ECHDC1	Q9NTX5	307 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	GPATCH2	Q9NW75	528 aa		7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.9	□□□□□ -1.14
HIPK1-210	ENST00000514621	RGS13	O14921	159 aa		7.89	□□□□□ -1.15
HIPK1-210	ENST00000514621	RECK	O95980	971 aa		7.89	□□□□□ -1.15
HIPK1-210	ENST00000514621	MECOM	Q03112	1051 aa		7.89	□□□□□ -1.15
HIPK1-210	ENST00000514621	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.89	□□□□□ -1.15
HIPK1-210	ENST00000514621	APOBEC3H	Q6NTF7	200 aa	Known RBP	7.89	□□□□□ -1.15
HIPK1-210	ENST00000514621	HHIPL2	Q6UWX4	724 aa		7.89	□□□□□ -1.15
HIPK1-210	ENST00000514621	GK5	Q6ZS86	529 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms