RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 INTS4Q96HW7 963 aaKnown RBP13.97□□□□□ -0.17
COPB2-212ENST00000514508 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.97□□□□□ -0.17
COPB2-212ENST00000514508 VAV3Q9UKW4 847 aa13.97□□□□□ -0.17
COPB2-212ENST00000514508 CEP131Q9UPN4 1083 aa13.97□□□□□ -0.17
COPB2-212ENST00000514508 WNT7AO00755 349 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 ACRP10323 421 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 ATP2B1P20020 1258 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 ATP4AP20648 1035 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 LRIT3Q3SXY7 679 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 TMEM240Q5SV17 173 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 MARCH8Q5T0T0 291 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 ZNF618Q5T7W0 954 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 MCTP1Q6DN14 999 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 ZNF365Q70YC5 407 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 RPAINQ86UA6 219 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 NRBP2Q9NSY0 501 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 PCDHA12Q9UN75 941 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 EVPLQ92817 2033 aa13.96□□□□□ -0.17
COPB2-212ENST00000514508 TET1Q8NFU7 2136 aa13.96□□□□□ -0.18
COPB2-212ENST00000514508 RSPH10B2B2RC85 870 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 DKC1O60832 514 aaKnown RBP eCLIP13.95□□□□□ -0.18
COPB2-212ENST00000514508 FGBP02675 491 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 OATP04181 439 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 RSPH10BP0C881 870 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 PDCP20941 246 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 MCM7P33993 719 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 TTC38Q5R3I4 469 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 DEFB128Q7Z7B8 93 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 RSPH3Q86UC2 560 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 RNPC3Q96LT9 517 aaKnown RBP13.95□□□□□ -0.18
COPB2-212ENST00000514508 MTMR9Q96QG7 549 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 MTIF3Q9H2K0 278 aaKnown RBP13.95□□□□□ -0.18
COPB2-212ENST00000514508 TTC12Q9H892 705 aaPredicted RBP13.95□□□□□ -0.18
COPB2-212ENST00000514508 PCDHA2Q9Y5H9 948 aa13.95□□□□□ -0.18
COPB2-212ENST00000514508 EML1O00423 815 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 ZNF862O60290 1169 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 ACTN1P12814 892 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 TXKP42681 527 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 RANBP2P49792 3224 aaKnown RBP13.94□□□□□ -0.18
COPB2-212ENST00000514508 PSMC5P62195 406 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 PRKCEQ02156 737 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 SPIRE1Q08AE8 756 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 EPHA7Q15375 998 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 ZNF174Q15697 407 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 FAM26DQ5JW98 314 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 TRAF7Q6Q0C0 670 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 MTHFD1LQ6UB35 978 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 TRAPPC12Q8WVT3 735 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 HERVK_113Q902F9 699 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 VWCEQ96DN2 955 aa13.94□□□□□ -0.18
COPB2-212ENST00000514508 FTOQ9C0B1 505 aaKnown RBP eCLIP13.94□□□□□ -0.181e-7■■■□□ 18.7
COPB2-212ENST00000514508 SMIM35A0A1B0GVV1 85 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 NBNO60934 754 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 CXCL10P02778 98 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 P4HBP07237 508 aaKnown RBP13.93□□□□□ -0.18
COPB2-212ENST00000514508 KLRC1P26715 233 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
COPB2-212ENST00000514508 FXR1P51114 621 aaKnown RBP eCLIP13.93□□□□□ -0.18
COPB2-212ENST00000514508 GPNMBQ14956 572 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 UGCGQ16739 394 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 RILPL1Q5EBL4 403 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 XKR3Q5GH77 459 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 RASIP1Q5U651 963 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 NCAPH2Q6IBW4 605 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 RUFY4Q6ZNE9 571 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 OTOP2Q7RTS6 562 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 TRMT1LQ7Z2T5 733 aaKnown RBP13.93□□□□□ -0.18
COPB2-212ENST00000514508 NME8Q8N427 588 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 BANK1Q8NDB2 785 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 DNAJB3Q8WWF6 145 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 TMEM60Q9H2L4 133 aa13.93□□□□□ -0.18
COPB2-212ENST00000514508 LOXHD1Q8IVV2 1947 aa13.92□□□□□ -0.18
COPB2-212ENST00000514508 MAGEB2O15479 319 aa13.92□□□□□ -0.18
COPB2-212ENST00000514508 CTSHP09668 335 aa13.92□□□□□ -0.18
COPB2-212ENST00000514508 OR52Z1P0C646 297 aa13.92□□□□□ -0.18
COPB2-212ENST00000514508 TOB1P50616 345 aaPredicted RBP13.92□□□□□ -0.18
COPB2-212ENST00000514508 MBTPS1Q14703 1052 aa13.92□□□□□ -0.18
COPB2-212ENST00000514508 IER5Q5VY09 327 aa13.92□□□□□ -0.18
COPB2-212ENST00000514508 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
COPB2-212ENST00000514508 NIFKQ9BYG3 293 aaKnown RBP13.92□□□□□ -0.18
COPB2-212ENST00000514508 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
COPB2-212ENST00000514508 SEPT9Q9UHD8 586 aaPredicted RBP13.92□□□□□ -0.18
COPB2-212ENST00000514508 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.91□□□□□ -0.18
COPB2-212ENST00000514508 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.91□□□□□ -0.18
COPB2-212ENST00000514508 LAD1O00515 517 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 STBD1O95210 358 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 C22orf31O95567 290 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 MRPS6P82932 125 aaKnown RBP13.91□□□□□ -0.18
COPB2-212ENST00000514508 CNKSR3Q6P9H4 555 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 C4orf19Q8IY42 314 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 ZBTB10Q96DT7 871 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 LXNQ9BS40 222 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.91□□□□□ -0.18
COPB2-212ENST00000514508 PCDHB6Q9Y5E3 794 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 SIP14410 1827 aa13.91□□□□□ -0.18
COPB2-212ENST00000514508 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms