RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 IFNAR2P48551 515 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 RASSF7Q02833 373 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 SESTD1Q86VW0 696 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 ENGASEQ8NFI3 743 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 ATP6V0A1Q93050 837 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 IL17RAQ96F46 866 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 OSBPL1AQ9BXW6 950 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 SLC5A4Q9NY91 659 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 PNMA2Q9UL42 364 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 NKX1-1Q15270 411 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-213ENST00000514442 NAA35Q5VZE5 725 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 CCDC13Q8IYE1 715 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 STAG2Q8N3U4 1231 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 MIEF2Q96C03 454 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 STK36Q9NRP7 1315 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 SFI1A8K8P3 1242 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 ZBTB5O15062 677 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 NTSR2O95665 410 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 RFX5P48382 616 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-213ENST00000514442 FAM160B1Q5W0V3 765 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 GBP7Q8N8V2 638 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-213ENST00000514442 POLD4Q9HCU8 107 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 PXDNLA1KZ92 1463 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 PPP2R2AP63151 447 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 CD163L1Q9NR16 1453 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 CPP00450 1065 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 PTPREP23469 700 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 CUL1Q13616 776 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 CCDC62Q6P9F0 684 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 FAM186BQ8IYM0 893 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 SH2D3CQ8N5H7 860 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 TBC1D16Q8TBP0 767 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 SGSM3Q96HU1 749 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 NACC1Q96RE7 527 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 TXLNGQ9NUQ3 528 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 USH1CQ9Y6N9 552 aa14.21□□□□□ -0.13
TCOF1-213ENST00000514442 TMEM191BP0C7N4 346 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 SKIP12755 728 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 AKR1B1P15121 316 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 PDE6CP51160 858 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 EHHADHQ08426 723 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 MTERF2Q49AM1 385 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 RAD9BQ6WBX8 426 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 SP8Q8IXZ3 490 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 PPP1R16BQ96T49 567 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 APOL6Q9BWW8 343 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 NBPF3Q9H094 633 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 SH3GLB2Q9NR46 395 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 EMILIN3Q9NT22 766 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 WDR19Q8NEZ3 1342 aa14.21□□□□□ -0.14
TCOF1-213ENST00000514442 TNNC2P02585 160 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 ASNSP08243 561 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 CCND2P30279 289 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 TCP11X2Q5H9J9 407 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 DTNBP1Q96EV8 351 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 MXD3Q9BW11 206 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 BHMT2Q9H2M3 363 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 KMT5AQ9NQR1 393 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 PCDHA13Q9Y5I0 950 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 CD2APQ9Y5K6 639 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 SPATA31D1Q6ZQQ2 1576 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 PABPN1LA6NDY0 278 aaKnown RBP14.2□□□□□ -0.14
TCOF1-213ENST00000514442 EIF3BP55884 814 aaKnown RBP14.2□□□□□ -0.14
TCOF1-213ENST00000514442 ZBED6P86452 979 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 GRM4Q14833 912 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 PPP2R5EQ16537 467 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 FAM160B2Q86V87 743 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 PIGOQ8TEQ8 1089 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 DCAF4Q8WV16 495 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 SERPINA10Q9UK55 444 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 PCDHA6Q9UN73 950 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 PCDHA8Q9Y5H6 950 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 PNPLA7Q6ZV29 1317 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 USP32Q8NFA0 1604 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 LRRN2O75325 713 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 PIK3CAP42336 1068 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 ARL6IP4Q66PJ3 421 aaKnown RBP14.2□□□□□ -0.14
TCOF1-213ENST00000514442 CERKQ8TCT0 537 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 SLC7A3Q8WY07 619 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 ELAC2Q9BQ52 826 aaKnown RBP14.2□□□□□ -0.14
TCOF1-213ENST00000514442 SPATA31A5Q5VU36 1347 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 SPATA31A7Q8IWB4 1347 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 STAMBPO95630 424 aa14.2□□□□□ -0.14
TCOF1-213ENST00000514442 EXOSC10Q01780 885 aaKnown RBP14.2□□□□□ -0.14
TCOF1-213ENST00000514442 TMEM131LA2VDJ0 1609 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 STXBP3O00186 592 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 OPHN1O60890 802 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 FKBP3Q00688 224 aaKnown RBP14.19□□□□□ -0.14
TCOF1-213ENST00000514442 SF3B3Q15393 1217 aaKnown RBP14.19□□□□□ -0.14
TCOF1-213ENST00000514442 PTGISQ16647 500 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 ZBTB10Q96DT7 871 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 ATP6V0A4Q9HBG4 840 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 RAVER2Q9HCJ3 691 aaKnown RBP14.19□□□□□ -0.14
TCOF1-213ENST00000514442 A0A1B0GTH6 734 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 PP2D1A8MPX8 630 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 FAM107AO95990 144 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 H2AFZP0C0S5 128 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 GAP43P17677 238 aa14.19□□□□□ -0.14
TCOF1-213ENST00000514442 CCNE1P24864 410 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms