RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 SFR1Q86XK3 245 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 TRIM59Q8IWR1 403 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 OSBPL9Q96SU4 736 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 REEP2Q9BRK0 252 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 MCM8Q9UJA3 840 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 DNM3Q9UQ16 869 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 TARSL2A2RTX5 802 aaKnown RBP13.78□□□□□ -0.2
SDHA-216ENST00000514027 CETN3O15182 167 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
SDHA-216ENST00000514027 MRPS25P82663 173 aaKnown RBP13.78□□□□□ -0.2
SDHA-216ENST00000514027 SPIRE1Q08AE8 756 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 FOXR2Q6PJQ5 311 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 CREG2Q8IUH2 290 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 FAM133AQ8N9E0 248 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 HYOU1Q9Y4L1 999 aa13.78□□□□□ -0.2
SDHA-216ENST00000514027 SSU72P8A0A1W2PR75 194 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 TLR2O60603 784 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 SERPING1P05155 500 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 MYBL2P10244 700 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 BMP3P12645 472 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 JAG1P78504 1218 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 GIT2Q14161 759 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 RBM26Q5T8P6 1007 aaKnown RBP13.77□□□□□ -0.21
SDHA-216ENST00000514027 NAIF1Q69YI7 327 aaPredicted RBP13.77□□□□□ -0.21
SDHA-216ENST00000514027 MOXD1Q6UVY6 613 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 CYP2W1Q8TAV3 490 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 MBOAT7Q96N66 472 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 NOX5Q96PH1 765 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 CSRNP1Q96S65 589 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 EDEM3Q9BZQ6 932 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 PITPNM2Q9BZ72 1349 aa13.77□□□□□ -0.21
SDHA-216ENST00000514027 NEBLO76041 1014 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
SDHA-216ENST00000514027 APBA3O96018 575 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 MYBP10242 640 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 SSR1P43307 286 aaKnown RBP13.76□□□□□ -0.21
SDHA-216ENST00000514027 KCNH2Q12809 1159 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 EZH2Q15910 746 aaKnown RBP13.76□□□□□ -0.21
SDHA-216ENST00000514027 ASTE1Q2TB18 679 aaPredicted RBP13.76□□□□□ -0.21
SDHA-216ENST00000514027 DCAF17Q5H9S7 520 aaPredicted RBP13.76□□□□□ -0.21
SDHA-216ENST00000514027 GMCL1P1Q8NEA9 526 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 LENG9Q96B70 501 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 NUCKS1Q9H1E3 243 aaKnown RBP13.76□□□□□ -0.21
SDHA-216ENST00000514027 FAM204AQ9H8W3 233 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 HDAC9Q9UKV0 1011 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 RSPH10B2B2RC85 870 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 H0YIN7 160 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 MSH4O15457 936 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 RSPH10BP0C881 870 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 SPATA31C1P0DKV0 1188 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 ACTN1P12814 892 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 TCP1P17987 556 aaKnown RBP13.76□□□□□ -0.21
SDHA-216ENST00000514027 RPA1P27694 616 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 CHRNA5P30532 468 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 SREBF1P36956 1147 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 KLHL30Q0D2K2 578 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 Q4G0T1 1027 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 SLC30A10Q6XR72 485 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
SDHA-216ENST00000514027 CRYGNQ8WXF5 182 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 GMCL1Q96IK5 515 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 PLCD4Q9BRC7 762 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 BHMT2Q9H2M3 363 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 SERPINA10Q9UK55 444 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
SDHA-216ENST00000514027 PJA2O43164 708 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 CHMP2AO43633 222 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 TBCAO75347 108 aaKnown RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 FOSP01100 380 aaPredicted RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 PAX7P23759 505 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 MARSP56192 900 aaKnown RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 SLC7A5Q01650 507 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 ASIC2Q16515 512 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 TCERG1LQ5VWI1 586 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 TTC19Q6DKK2 380 aaPredicted RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 SYT2Q8N9I0 419 aaPredicted RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 SPATA4Q8NEY3 305 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 N4BP2L2Q92802 583 aaPredicted RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 LRRC1Q9BTT6 524 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 VEZTQ9HBM0 779 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 SLC24A3Q9HC58 644 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 LUC7LQ9NQ29 371 aaKnown RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 TBX3O15119 743 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 GCNT3O95395 438 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 CFBP00751 764 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 ECE1P42892 770 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 PAFAH1B1P43034 410 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 HDLBPQ00341 1268 aaKnown RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 RRP1BQ14684 758 aaKnown RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 ZKSCAN8Q15776 578 aaPredicted RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 KNOP1Q1ED39 458 aaKnown RBP13.75□□□□□ -0.21
SDHA-216ENST00000514027 HDAC7Q8WUI4 952 aa13.75□□□□□ -0.21
SDHA-216ENST00000514027 SELENOOQ9BVL4 669 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms