RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 FSCN2O14926 492 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 SP100P23497 879 aaPredicted RBP13.9□□□□□ -0.18
PTPN20-229ENST00000513756 SARSP49591 514 aaKnown RBP13.9□□□□□ -0.18
PTPN20-229ENST00000513756 CLCN5P51795 746 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 ERVFC1P60507 584 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 MARCH8Q5T0T0 291 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 CES5AQ6NT32 575 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 SYCE2Q6PIF2 218 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 SEPT1Q8WYJ6 367 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 GLG1Q92896 1179 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 KRT23Q9C075 422 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 FAM49AQ9H0Q0 323 aaPredicted RBP13.9□□□□□ -0.18
PTPN20-229ENST00000513756 SMARCAD1Q9H4L7 1026 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 PUF60Q9UHX1 559 aaKnown RBP13.9□□□□□ -0.18
PTPN20-229ENST00000513756 MAD2L2Q9UI95 211 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 LZTS1Q9Y250 596 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 DOCK5Q9H7D0 1870 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 ZNF292O60281 2723 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
PTPN20-229ENST00000513756 TBKBP1A7MCY6 615 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 BRD1O95696 1058 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 MARK3P27448 753 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 GATMP50440 423 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 IGBP1P78318 339 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 KCNC3Q14003 757 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 PCNX4Q63HM2 1172 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 LLGL2Q6P1M3 1020 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 CASP10Q92851 521 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 CDHR1Q96JP9 859 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 APOL5Q9BWW9 433 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 CNNM2Q9H8M5 875 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 NGRNQ9NPE2 291 aaKnown RBP13.89□□□□□ -0.19
PTPN20-229ENST00000513756 TELO2Q9Y4R8 837 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 IGSF9BQ9UPX0 1349 aa13.89□□□□□ -0.19
PTPN20-229ENST00000513756 PNMA6FA0A0J9YX94 578 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
PTPN20-229ENST00000513756 IBSPP21815 317 aaPredicted RBP13.88□□□□□ -0.19
PTPN20-229ENST00000513756 PDE1AP54750 535 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 ITIH3Q06033 890 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 ODR4Q5SWX8 454 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 NME8Q8N427 588 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 COLGALT1Q8NBJ5 622 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 CUL5Q93034 780 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 PIGSQ96S52 555 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 CELF4Q9BZC1 486 aaKnown RBP13.88□□□□□ -0.19
PTPN20-229ENST00000513756 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 ENTPD7Q9NQZ7 604 aa13.88□□□□□ -0.19
PTPN20-229ENST00000513756 MYO10Q9HD67 2058 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 DENND3A2RUS2 1198 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 C2CD4DB7Z1M9 353 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 LAG3P18627 525 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 MTHFRP42898 656 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 PLCB3Q01970 1234 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 IMMTQ16891 758 aaKnown RBP13.87□□□□□ -0.19
PTPN20-229ENST00000513756 ANKRD45Q5TZF3 282 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 SMARCC2Q8TAQ2 1214 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
PTPN20-229ENST00000513756 GPRASP2Q96D09 838 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 ADAM7Q9H2U9 754 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
PTPN20-229ENST00000513756 PCDHA2Q9Y5H9 948 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 DMXL1Q9Y485 3027 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 KDM3AQ9Y4C1 1321 aa13.87□□□□□ -0.19
PTPN20-229ENST00000513756 LAMA4Q16363 1823 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 GSTTP1A0A1W2PQM5 241 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 INSRRP14616 1297 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 KRT76Q01546 638 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 KRT17Q04695 432 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 TMEM62Q0P6H9 643 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 NFX1Q12986 1120 aaKnown RBP13.86□□□□□ -0.19
PTPN20-229ENST00000513756 DGLUCYQ7Z3D6 616 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 ZDHHC14Q8IZN3 488 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 TMX1Q9H3N1 280 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 SEMA4AQ9H3S1 761 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 AZI2Q9H6S1 392 aa13.86□□□□□ -0.19
PTPN20-229ENST00000513756 FNDC1Q4ZHG4 1894 aaPredicted RBP13.85□□□□□ -0.19
PTPN20-229ENST00000513756 KCNA2P16389 499 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 APOBRQ0VD83 1088 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 FAM102BQ5T8I3 360 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 TMC7Q7Z402 723 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 TDRD5Q8NAT2 981 aaKnown RBP13.85□□□□□ -0.19
PTPN20-229ENST00000513756 FLCNQ8NFG4 579 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 KCNG4Q8TDN1 519 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 RILPL2Q969X0 211 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 ATP6V0A4Q9HBG4 840 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 RGS18Q9NS28 235 aa13.85□□□□□ -0.19
PTPN20-229ENST00000513756 LOXHD1Q8IVV2 1947 aa13.84□□□□□ -0.19
PTPN20-229ENST00000513756 SMIM35A0A1B0GVV1 85 aa13.84□□□□□ -0.19
PTPN20-229ENST00000513756 HIDE1A8MVS5 230 aa13.84□□□□□ -0.19
PTPN20-229ENST00000513756 ATP9AO75110 1047 aa13.84□□□□□ -0.19
PTPN20-229ENST00000513756 PPM1AP35813 382 aa13.84□□□□□ -0.19
PTPN20-229ENST00000513756 BMS1Q14692 1282 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms