RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 HLA-CQ95604 372 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 YME1L1Q96TA2 773 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 ZNF577Q9BSK1 485 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 SLC26A6Q9BXS9 759 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 FTHL17Q9BXU8 183 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 NRBP2Q9NSY0 501 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 TMEM260Q9NX78 707 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 PPP4R2Q9NY27 417 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 TELO2Q9Y4R8 837 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 PCDHA10Q9Y5I2 948 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 TET1Q8NFU7 2136 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 XIRP2A4UGR9 3374 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 PRRC2BQ5JSZ5 2229 aaKnown RBP8.28□□□□□ -1.08
HTT-212ENST00000513639 SMIM35A0A1B0GVV1 85 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 LINC01553A4QN01 128 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 FAM86B1E9PN63 330 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 RIOK3O14730 519 aaKnown RBP8.28□□□□□ -1.08
HTT-212ENST00000513639 CDKL5O76039 1030 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 PSAPP07602 524 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 FAM86B2P0C5J1 330 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 KLRC1P26715 233 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 NLRP5P59047 1200 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 CCT2P78371 535 aaKnown RBP8.28□□□□□ -1.08
HTT-212ENST00000513639 MRPS6P82932 125 aaKnown RBP8.28□□□□□ -1.08
HTT-212ENST00000513639 KRT76Q01546 638 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 GRB10Q13322 594 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 PLCB4Q15147 1175 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 NTRK3Q16288 839 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 TCTN1Q2MV58 587 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 SWSAP1Q6NVH7 229 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 RUFY4Q6ZNE9 571 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 TSHZ1Q6ZSZ6 1077 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 TMCO2Q7Z6W1 182 aaPredicted RBP8.28□□□□□ -1.08
HTT-212ENST00000513639 CKAP2LQ8IYA6 745 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 SPRYD3Q8NCJ5 442 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 FBXO22Q8NEZ5 403 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 SP7Q8TDD2 431 aaPredicted RBP8.28□□□□□ -1.08
HTT-212ENST00000513639 ATP8B4Q8TF62 1192 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 CRYGNQ8WXF5 182 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 PHKBQ93100 1093 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 PGBD1Q96JS3 809 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 PCYT2Q99447 389 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 CELF4Q9BZC1 486 aaKnown RBP8.28□□□□□ -1.08
HTT-212ENST00000513639 SUGCTQ9HAC7 445 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 ZNF302Q9NR11 478 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 PDRG1Q9NUG6 133 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 RWDD3Q9Y3V2 267 aa8.28□□□□□ -1.08
HTT-212ENST00000513639 NID2Q14112 1375 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 IGLV3-22A0A075B6J6 115 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.27□□□□□ -1.09
HTT-212ENST00000513639 LCHNA4D1U4 455 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 TNFRSF10AO00220 468 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 MAGEB2O15479 319 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 DHX15O43143 795 aaKnown RBP8.27□□□□□ -1.09
HTT-212ENST00000513639 NCK2O43639 380 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 LPXNO60711 386 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 DEXIO95424 95 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 RB1P06400 928 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 GHRP10912 638 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 XBP1P17861 261 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 TMOD1P28289 359 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 CDC42EP1Q00587 391 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 LPIN1Q14693 890 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 ANKRD1Q15327 319 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 PRR16Q569H4 304 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 FBXO47Q5MNV8 452 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 MTHFD1LQ6UB35 978 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 FIBCD1Q8N539 461 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 FAM167AQ96KS9 214 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 RIT2Q99578 217 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 FAM49AQ9H0Q0 323 aaPredicted RBP8.27□□□□□ -1.09
HTT-212ENST00000513639 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 MTUS1Q9ULD2 1270 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 CEP131Q9UPN4 1083 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 SAMM50Q9Y512 469 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 MAFBQ9Y5Q3 323 aaPredicted RBP8.27□□□□□ -1.09
HTT-212ENST00000513639 CDY2AQ9Y6F7 541 aa8.27□□□□□ -1.09
HTT-212ENST00000513639 COL1A2P08123 1366 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 SCN5AQ14524 2016 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 KAT6AQ92794 2004 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 CYP3A7-CYP3A51PA0A087WV96 503 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 EPOPA6NHQ4 379 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 WDR64B1ANS9 1081 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 H3BNC9 293 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 DDX39AO00148 427 aaKnown RBP8.26□□□□□ -1.09
HTT-212ENST00000513639 GPR182O15218 404 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 CCNE2O96020 404 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 STAG3L1P0CL83 205 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 BMP1P13497 986 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 CYP3A7P24462 503 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 SFNP31947 248 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 BMPR1AP36894 532 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 ANAPC15P60006 121 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 MGAT3Q09327 533 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 PAK2Q13177 524 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 TOB2Q14106 344 aaPredicted RBP8.26□□□□□ -1.09
HTT-212ENST00000513639 EPC2Q52LR7 807 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 TMEM192Q8IY95 271 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 KIAA0319LQ8IZA0 1049 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms