RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 B4DLN1 442 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 CHMP2AO43633 222 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 MFAP3LO75121 409 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 TBCAO75347 108 aaKnown RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 EIF3JO75822 258 aaKnown RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 CNMDO75829 334 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 GYPCP04921 128 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 MYCLP12524 364 aaPredicted RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 KCNA2P16389 499 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 OSBPP22059 807 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 EDNRBP24530 442 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 PSMC5P62195 406 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 HERVK_113P62684 666 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 UBXN1Q04323 297 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 RBL2Q08999 1139 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 ALCAMQ13740 583 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 KNOP1Q1ED39 458 aaKnown RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 MIIPQ5JXC2 388 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 E4F1Q66K89 784 aaPredicted RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 DLK2Q6UY11 383 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 GADL1Q6ZQY3 521 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 NYAP1Q6ZVC0 841 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 STXBP4Q6ZWJ1 553 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 SFR1Q86XK3 245 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 SHCBP1Q8NEM2 672 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 OTUD5Q96G74 571 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 CLMNQ96JQ2 1002 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 BAG1Q99933 345 aaPredicted RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 RUSC1Q9BVN2 902 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 STRA6Q9BX79 667 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 MOV10L1Q9BXT6 1211 aaKnown RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 EDEM3Q9BZQ6 932 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 SPATC1LQ9H0A9 340 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 ASCC2Q9H1I8 757 aaPredicted RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 PARVGQ9HBI0 331 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 BTBD7Q9P203 1132 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 WRAP73Q9P2S5 460 aaPredicted RBP9.26□□□□□ -0.93
RNF4-220ENST00000513578 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 FAM184BQ9ULE4 1060 aa9.26□□□□□ -0.93
RNF4-220ENST00000513578 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 A0A1W2PQJ5 194 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 ARHGEF35A5YM69 484 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 GOLGA6L9A6NEM1 432 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 CALUO43852 315 aaPredicted RBP9.25□□□□□ -0.93
RNF4-220ENST00000513578 ATP9AO75110 1047 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 COBLO75128 1261 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 RGS20O76081 388 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 FAM13AO94988 1023 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 CCNE2O96020 404 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 MTIF2P46199 727 aaKnown RBP9.25□□□□□ -0.93
RNF4-220ENST00000513578 IRX3P78415 501 aaPredicted RBP9.25□□□□□ -0.93
RNF4-220ENST00000513578 PPP2R3AQ06190 1150 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 SNAPC2Q13487 334 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 MYBPC2Q14324 1141 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 LRRC41Q15345 812 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 STXBP2Q15833 593 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 VWA3BQ502W6 1294 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 FKBP15Q5T1M5 1219 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 GPAT2Q6NUI2 795 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 FRMD5Q7Z6J6 570 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 TMTC1Q8IUR5 882 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 C17orf53Q8N3J3 647 aaPredicted RBP9.25□□□□□ -0.93
RNF4-220ENST00000513578 FAM133AQ8N9E0 248 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 SLC17A8Q8NDX2 589 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 GLIS3Q8NEA6 775 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 PIGOQ8TEQ8 1089 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 KCNN1Q92952 543 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 OPTNQ96CV9 577 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 PRIMPOLQ96LW4 560 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 FIZ1Q96SL8 496 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
RNF4-220ENST00000513578 TTYH3Q9C0H2 523 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 ST6GALNAC4Q9H4F1 302 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 TYW1Q9NV66 732 aaKnown RBP9.25□□□□□ -0.93
RNF4-220ENST00000513578 CAPN11Q9UMQ6 739 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 PCDHA10Q9Y5I2 948 aa9.25□□□□□ -0.93
RNF4-220ENST00000513578 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 TRAF5O00463 557 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 CETN3O15182 167 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 SLC16A3O15427 465 aaKnown RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 ZSCAN12O43309 604 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 PPP1R37O75864 691 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 ATG7O95352 703 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 RPL13P26373 211 aaKnown RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 CASP14P31944 242 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 HOXD13P35453 343 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 RARRES1P49788 294 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 ALDH5A1P51649 535 aaPredicted RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 ADKP55263 362 aaKnown RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 SNRPFP62306 86 aaKnown RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 CDK17Q00537 523 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 TBC1D8BQ0IIM8 1120 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 MAPK7Q13164 816 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 TTLL12Q14166 644 aaPredicted RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 PLS1Q14651 629 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 PADI6Q6TGC4 694 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 ZNF720Q7Z2F6 126 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 TRIM59Q8IWR1 403 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 ANKRD35Q8N283 1001 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms