RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TMEM260Q9NX78 707 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 PADI3Q9ULW8 664 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 VPS13AQ96RL7 3174 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 SALL3Q9BXA9 1300 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 LAMA4Q16363 1823 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 M0QZ92 97 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 FSCN2O14926 492 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 ASGR2P07307 311 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 IER5Q5VY09 327 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 TMEM184AQ6ZMB5 413 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 COLGALT1Q8NBJ5 622 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 POMKQ9H5K3 350 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 ENTPD7Q9NQZ7 604 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 TRPV2Q9Y5S1 764 aa12.12□□□□□ -0.47
CLDND1-227ENST00000513452 IGSF9BQ9UPX0 1349 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 CACNA1BQ00975 2339 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 NCOR2Q9Y618 2525 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 TBKBP1A7MCY6 615 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 ZNF213O14771 459 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 HOXB8P17481 243 aaPredicted RBP12.11□□□□□ -0.47
CLDND1-227ENST00000513452 SARSP49591 514 aaKnown RBP12.11□□□□□ -0.47
CLDND1-227ENST00000513452 TMEM266Q2M3C6 531 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 PDE12Q6L8Q7 609 aaKnown RBP12.11□□□□□ -0.47
CLDND1-227ENST00000513452 DGLUCYQ7Z3D6 616 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 FLCNQ8NFG4 579 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 GLG1Q92896 1179 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 PIGSQ96S52 555 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 TCF25Q9BQ70 676 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 UBAC1Q9BSL1 405 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 ERAP1Q9NZ08 941 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 ZSWIM5Q9P217 1185 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 PCDHB7Q9Y5E2 793 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 SQORQ9Y6N5 450 aa12.11□□□□□ -0.47
CLDND1-227ENST00000513452 EPG5Q9HCE0 2579 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 HIDE1A8MVS5 230 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 NT5C2P49902 561 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 CLCN5P51795 746 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 SLC35G1Q2M3R5 365 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 IFIT1BQ5T764 474 aaKnown RBP12.1□□□□□ -0.47
CLDND1-227ENST00000513452 CWF19L1Q69YN2 538 aaKnown RBP12.1□□□□□ -0.47
CLDND1-227ENST00000513452 RASGRP4Q8TDF6 673 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 SENP7Q9BQF6 1050 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 TMX1Q9H3N1 280 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 RCAN3Q9UKA8 241 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 KAT6AQ92794 2004 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 ZNF292O60281 2723 aa12.1□□□□□ -0.47
CLDND1-227ENST00000513452 EP300Q09472 2414 aaPredicted RBP12.09□□□□□ -0.47
CLDND1-227ENST00000513452 GSTTP1A0A1W2PQM5 241 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 KRT37O76014 449 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
CLDND1-227ENST00000513452 WEE2P0C1S8 567 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 NFX1Q12986 1120 aaKnown RBP12.09□□□□□ -0.47
CLDND1-227ENST00000513452 TRAF1Q13077 416 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 ANGPT1Q15389 498 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 FAM102BQ5T8I3 360 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 CES5AQ6NT32 575 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 TDRD5Q8NAT2 981 aaKnown RBP12.09□□□□□ -0.47
CLDND1-227ENST00000513452 GIMAP8Q8ND71 665 aaPredicted RBP12.09□□□□□ -0.47
CLDND1-227ENST00000513452 KCNG4Q8TDN1 519 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 TRAPPC12Q8WVT3 735 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 MRPS27Q92552 414 aaKnown RBP12.09□□□□□ -0.47
CLDND1-227ENST00000513452 CASP10Q92851 521 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 NECTIN4Q96NY8 510 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 CELF4Q9BZC1 486 aaKnown RBP12.09□□□□□ -0.47
CLDND1-227ENST00000513452 TYW1Q9NV66 732 aaKnown RBP12.09□□□□□ -0.47
CLDND1-227ENST00000513452 PKD2L1Q9P0L9 805 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 LIMD1Q9UGP4 676 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 LZTS1Q9Y250 596 aa12.09□□□□□ -0.47
CLDND1-227ENST00000513452 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
CLDND1-227ENST00000513452 RRN3P2A6NIE6 340 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 MGEA5O60502 916 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 ATP9AO75110 1047 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 ARP10275 920 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 INSRRP14616 1297 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 KCNA2P16389 499 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 LAG3P18627 525 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 PDE1AP54750 535 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
CLDND1-227ENST00000513452 NLRX1Q86UT6 975 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 CCDC105Q8IYK2 499 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 KIAA2013Q8IYS2 634 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 SEPT1Q8WYJ6 367 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 ADAM2Q99965 735 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 ADAM7Q9H2U9 754 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 SMARCAD1Q9H4L7 1026 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
CLDND1-227ENST00000513452 PUF60Q9UHX1 559 aaKnown RBP12.08□□□□□ -0.48
CLDND1-227ENST00000513452 GINS2Q9Y248 185 aa12.08□□□□□ -0.48
CLDND1-227ENST00000513452 PNMA6FA0A0J9YX94 578 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 PI15O43692 258 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 FGFR1P11362 822 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 AOC1P19801 751 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 PDE4AP27815 886 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 PBX3P40426 434 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms