RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TUT1Q9H6E5 874 aaKnown RBP11.06□□□□□ -0.64
CLCN3-208ENST00000512813 PRMT8Q9NR22 394 aaPredicted RBP11.06□□□□□ -0.64
CLCN3-208ENST00000512813 CACNA2D2Q9NY47 1150 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 CFAP46Q8IYW2 2715 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 LAG3P18627 525 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 RARSP54136 660 aaKnown RBP11.05□□□□□ -0.64
CLCN3-208ENST00000512813 SMC1AQ14683 1233 aaKnown RBP11.05□□□□□ -0.64
CLCN3-208ENST00000512813 STXBP2Q15833 593 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 LPAL2Q16609 132 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 SBK1Q52WX2 424 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 TMC7Q7Z402 723 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 GPR149Q86SP6 731 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 CELF5Q8N6W0 485 aaKnown RBP11.05□□□□□ -0.64
CLCN3-208ENST00000512813 FEZF2Q8TBJ5 459 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 NXPE3Q969Y0 559 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 SHDQ96IW2 340 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 SPATA33Q96N06 139 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 SLC2A4RGQ9NR83 387 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 SETD4Q9NVD3 440 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 HCSTQ9UBK5 93 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 LRFN2Q9ULH4 789 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 MRVI1Q9Y6F6 885 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
CLCN3-208ENST00000512813 C2orf16Q68DN1 1984 aa11.05□□□□□ -0.64
CLCN3-208ENST00000512813 RALGAPA1Q6GYQ0 2036 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 N4BP1O75113 896 aaKnown RBP11.04□□□□□ -0.64
CLCN3-208ENST00000512813 CD52P31358 61 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 PTPN14Q15678 1187 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 ALDH1L2Q3SY69 923 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 LMBR1Q8WVP7 490 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 CHMP4CQ96CF2 233 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 BBC3Q96PG8 261 aaPredicted RBP11.04□□□□□ -0.64
CLCN3-208ENST00000512813 DDX23Q9BUQ8 820 aaKnown RBP11.04□□□□□ -0.64
CLCN3-208ENST00000512813 OSBPL6Q9BZF3 934 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 AGO3Q9H9G7 860 aaKnown RBP11.04□□□□□ -0.64
CLCN3-208ENST00000512813 TYW1Q9NV66 732 aaKnown RBP11.04□□□□□ -0.64
CLCN3-208ENST00000512813 SLC4A4Q9Y6R1 1079 aa11.04□□□□□ -0.64
CLCN3-208ENST00000512813 KANSL1LA0AUZ9 987 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 LGALS2P05162 132 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
CLCN3-208ENST00000512813 SPINK2P20155 84 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 PPM1AP35813 382 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 CELF3Q5SZQ8 465 aaKnown RBP11.03□□□□□ -0.64
CLCN3-208ENST00000512813 TAF2Q6P1X5 1199 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 TSSK4Q6SA08 328 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 BTNL9Q6UXG8 535 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 ZNF444Q8N0Y2 327 aaPredicted RBP11.03□□□□□ -0.64
CLCN3-208ENST00000512813 STK11IPQ8N1F8 1099 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 RGS22Q8NE09 1264 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 NEDD1Q8NHV4 660 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 NSUN6Q8TEA1 469 aaKnown RBP11.03□□□□□ -0.64
CLCN3-208ENST00000512813 IWS1Q96ST2 819 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 MYL10Q9BUA6 226 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 CWH43Q9H720 699 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 SFXN1Q9H9B4 322 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 ZNF287Q9HBT7 754 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 EPS15L1Q9UBC2 864 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 SQORQ9Y6N5 450 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 ZNF462Q96JM2 2506 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 WDR19Q8NEZ3 1342 aa11.03□□□□□ -0.64
CLCN3-208ENST00000512813 TBKBP1A7MCY6 615 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 PRDM1O75626 825 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 EIF3JO75822 258 aaKnown RBP11.02□□□□□ -0.65
CLCN3-208ENST00000512813 EPCAMP16422 314 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 ADD2P35612 726 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 SARSP49591 514 aaKnown RBP11.02□□□□□ -0.65
CLCN3-208ENST00000512813 FOXC1Q12948 553 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 POLA2Q14181 598 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 CCDC6Q16204 474 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 AASDHQ4L235 1098 aaPredicted RBP11.02□□□□□ -0.65
CLCN3-208ENST00000512813 PSAPL1Q6NUJ1 521 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 RSPH3Q86UC2 560 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 GLIS3Q8NEA6 775 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 LSM14BQ9BX40 385 aaKnown RBP11.02□□□□□ -0.65
CLCN3-208ENST00000512813 API5Q9BZZ5 524 aaKnown RBP11.02□□□□□ -0.65
CLCN3-208ENST00000512813 GPSM3Q9Y4H4 160 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 CCDC171Q6TFL3 1326 aa11.02□□□□□ -0.65
CLCN3-208ENST00000512813 DOCK8Q8NF50 2099 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 EIF4E1BA6NMX2 242 aaKnown RBP11.01□□□□□ -0.65
CLCN3-208ENST00000512813 GOLIM4O00461 696 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 GGPS1O95749 300 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 GNAI2P04899 355 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 TSPY3P0CV98 308 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 TSPY8P0CW00 308 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 TDGF1P13385 188 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 PDE4AP27815 886 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 ARHGAP4P98171 946 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 KRT17Q04695 432 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 SYDE2Q5VT97 1194 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 C15orf39Q6ZRI6 1047 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 CABP7Q86V35 215 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 SLC22A17Q8WUG5 538 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 GLG1Q92896 1179 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 MAF1Q9H063 256 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 SUPT16HQ9Y5B9 1047 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms