RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SLC16A11Q8NCK7 471 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 SCAND2PQ9GZW5 306 aaPredicted RBP3.62□□□□□ -1.83
PDGFC-208ENST00000512711 UCKL1Q9NWZ5 548 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 SNTG2Q9NY99 539 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 NDOR1Q9UHB4 597 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 NUB1Q9Y5A7 615 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 ATP23Q9Y6H3 246 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 SLC4A7Q9Y6M7 1214 aa3.62□□□□□ -1.83
PDGFC-208ENST00000512711 MATN2O00339 956 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 SCDO00767 359 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 MMEP08473 750 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 POLD1P28340 1107 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 RRADP55042 308 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 ST5P78524 1137 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 IL13RA1P78552 427 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 USP10Q14694 798 aaKnown RBP3.61□□□□□ -1.83
PDGFC-208ENST00000512711 CRY1Q16526 586 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 SPDYAQ5MJ70 313 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 NBPF6Q5VWK0 638 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 Q6ZSN1 163 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 DPH6Q7L8W6 267 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 CISD2Q8N5K1 135 aaKnown RBP3.61□□□□□ -1.83
PDGFC-208ENST00000512711 GSTCDQ8NEC7 633 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 NBPF4Q96M43 638 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 IPO9Q96P70 1041 aaKnown RBP3.61□□□□□ -1.83
PDGFC-208ENST00000512711 DEPDC7Q96QD5 511 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 LMF1Q96S06 567 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 CARD11Q9BXL7 1154 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 GALNT8Q9NY28 637 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 ARHGAP28Q9P2N2 729 aa3.61□□□□□ -1.83
PDGFC-208ENST00000512711 PRAMEF25A6NGN4 478 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 OVOL3O00110 214 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 PTGS1P23219 599 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 AOAHP28039 575 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 KCNQ1P51787 676 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 CD83Q01151 205 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 LONRF2Q1L5Z9 754 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 WDR72Q3MJ13 1102 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 AGBL4Q5VU57 503 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 OVCH1Q7RTY7 1134 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 NOSTRINQ8IVI9 506 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 JMYQ8N9B5 988 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 NEIL1Q96FI4 390 aaPredicted RBP3.6□□□□□ -1.83
PDGFC-208ENST00000512711 SRPK1Q96SB4 655 aaKnown RBP3.6□□□□□ -1.83
PDGFC-208ENST00000512711 DPYSL5Q9BPU6 564 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 ZNF747Q9BV97 191 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 ZDHHC5Q9C0B5 715 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 SEC61A2Q9H9S3 476 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 INCENPQ9NQS7 918 aa3.6□□□□□ -1.83
PDGFC-208ENST00000512711 ZFR2Q9UPR6 939 aaKnown RBP3.6□□□□□ -1.83
PDGFC-208ENST00000512711 TCRBV16S1A1N1A0A5B0 115 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 PRAMEF22A3QJZ6 481 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 CLASP2O75122 1294 aaKnown RBP3.59□□□□□ -1.83
PDGFC-208ENST00000512711 ZBTB48P10074 688 aaPredicted RBP3.59□□□□□ -1.83
PDGFC-208ENST00000512711 C6P13671 934 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 ACAP1Q15027 740 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 STILQ15468 1287 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 FIGNQ5HY92 759 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 IGFL4Q6B9Z1 124 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 EP400NLQ6ZTU2 488 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 ZFPM1Q8IX07 1006 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 FUKQ8N0W3 1084 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 GIMAP8Q8ND71 665 aaPredicted RBP3.59□□□□□ -1.83
PDGFC-208ENST00000512711 PMFBP1Q8TBY8 1022 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 ASB15Q8WXK1 588 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 WNK4Q96J92 1243 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 MAGEB10Q96LZ2 347 aaPredicted RBP3.59□□□□□ -1.83
PDGFC-208ENST00000512711 CLUHP3Q96NS8 147 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 SORCS2Q96PQ0 1159 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 HIRIP3Q9BW71 556 aaPredicted RBP3.59□□□□□ -1.83
PDGFC-208ENST00000512711 KIAA1683Q9H0B3 1180 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 KANSL2Q9H9L4 492 aa3.59□□□□□ -1.83
PDGFC-208ENST00000512711 GSTA4O15217 222 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 RAPGEF3O95398 923 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 SLPIP03973 132 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 CR2P20023 1033 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 ACVRL1P37023 503 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 ECE1P42892 770 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 RAC3P60763 192 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 DUSP8Q13202 625 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 EIF4HQ15056 248 aaKnown RBP3.58□□□□□ -1.84
PDGFC-208ENST00000512711 TRIM61Q5EBN2 209 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 FAM47CQ5HY64 1035 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 KANK2Q63ZY3 851 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 TRIM68Q6AZZ1 485 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 CRIP3Q6Q6R5 217 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 DPP8Q6V1X1 898 aaPredicted RBP3.58□□□□□ -1.84
PDGFC-208ENST00000512711 LRP10Q7Z4F1 713 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 REXO1L1PQ8IX06 675 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 IGSF22Q8N9C0 903 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 CFHR4Q92496 578 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 DLG3Q92796 817 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 EXTL1Q92935 676 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 C8orf37Q96NL8 207 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 GBP4Q96PP9 640 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 ADOQ96SZ5 270 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 BTBD2Q9BX70 525 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 AGO3Q9H9G7 860 aaKnown RBP3.58□□□□□ -1.84
PDGFC-208ENST00000512711 TRIM39Q9HCM9 518 aa3.58□□□□□ -1.84
PDGFC-208ENST00000512711 HECAQ9UBI9 543 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms