RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 RXRAP19793 462 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 CD52P31358 61 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 LTBRP36941 435 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 SREBF1P36956 1147 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 NAPAP54920 295 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 EXOSC10Q01780 885 aaKnown RBP14.33□□□□□ -0.12
VEGFA-216ENST00000512683 UBE3AQ05086 875 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 ZP2Q05996 745 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 KRT32Q14532 448 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 PLCB4Q15147 1175 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 RTN4RL1Q86UN2 441 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-216ENST00000512683 CCDC82Q8N4S0 544 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 LRRC2Q9BYS8 371 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 AGO4Q9HCK5 861 aaKnown RBP14.33□□□□□ -0.12
VEGFA-216ENST00000512683 BARHL2Q9NY43 387 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 PADI3Q9ULW8 664 aa14.33□□□□□ -0.12
VEGFA-216ENST00000512683 V9GY48 417 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-216ENST00000512683 SMCO2A6NFE2 343 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 ZBTB43O43298 467 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 CDC45O75419 566 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 CYP3A4P08684 503 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 ADCY7P51828 1080 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 IGBP1P78318 339 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 KRT76Q01546 638 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 FUT2Q10981 343 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 HYAL1Q12794 435 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 PAK2Q13177 524 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 ADAM15Q13444 863 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 ZNF484Q5JVG2 852 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 FAM160B1Q5W0V3 765 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 WWC2Q6AWC2 1192 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 MTHFD1LQ6UB35 978 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 EP400NLQ6ZTU2 488 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 MICU3Q86XE3 530 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 SPPL3Q8TCT6 385 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 FAM49AQ9H0Q0 323 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-216ENST00000512683 AAASQ9NRG9 546 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 C1orf112Q9NSG2 853 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 TBC1D22BQ9NU19 505 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 COL1A2P08123 1366 aa14.32□□□□□ -0.12
VEGFA-216ENST00000512683 GPR182O15218 404 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 EYA4O95677 639 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 ARP10275 920 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 SCG2P13521 617 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 ZNF76P36508 570 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 CLK2P49760 499 aaKnown RBP14.31□□□□□ -0.12
VEGFA-216ENST00000512683 SMAD4Q13485 552 aaKnown RBP14.31□□□□□ -0.12
VEGFA-216ENST00000512683 RTN1Q16799 776 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 ADCK5Q3MIX3 580 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 PDE12Q6L8Q7 609 aaKnown RBP14.31□□□□□ -0.12
VEGFA-216ENST00000512683 ABHD15Q6UXT9 468 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 EFHBQ8N7U6 833 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 CYP2W1Q8TAV3 490 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 ATP8B4Q8TF62 1192 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 PKD2L1Q9P0L9 805 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 LRFN2Q9ULH4 789 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 PCDHB7Q9Y5E2 793 aa14.31□□□□□ -0.12
VEGFA-216ENST00000512683 hCG_1642624A0A1W2PR95 340 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 MBTPS2O43462 519 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 KLRC1P26715 233 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 SARSP49591 514 aaKnown RBP14.3□□□□□ -0.12
VEGFA-216ENST00000512683 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-216ENST00000512683 CAMK1Q14012 370 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 PKN1Q16512 942 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 MIS18BP1Q6P0N0 1132 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 CCDC12Q8WUD4 166 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-216ENST00000512683 ANO3Q9BYT9 981 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 RGS18Q9NS28 235 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 CD207Q9UJ71 328 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 PCDHB12Q9Y5F1 795 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 MRPL42Q9Y6G3 142 aaKnown RBP14.3□□□□□ -0.12
VEGFA-216ENST00000512683 TCF20Q9UGU0 1960 aaKnown RBP14.3□□□□□ -0.12
VEGFA-216ENST00000512683 REV3LO60673 3130 aa14.3□□□□□ -0.12
VEGFA-216ENST00000512683 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 ESYT2A0FGR8 921 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 STXBP3O00186 592 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 BACH1O14867 736 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 MAGEB2O15479 319 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 RPS6KA5O75582 802 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 CRYBB1P53674 252 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-216ENST00000512683 FAM189BP81408 668 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 COASYQ13057 564 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 HERC4Q5GLZ8 1057 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-216ENST00000512683 ZNF746Q6NUN9 644 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-216ENST00000512683 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 SLC24A5Q71RS6 500 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 SMAP1Q8IYB5 467 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-216ENST00000512683 KIAA0319LQ8IZA0 1049 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 LINC01599Q8WXQ3 324 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-216ENST00000512683 MFSD14AQ96MC6 490 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 TCEANC2Q96MN5 208 aa14.29□□□□□ -0.12
VEGFA-216ENST00000512683 CDCA3Q99618 268 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-216ENST00000512683 ELAC1Q9H777 363 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms