RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 POLRMTO00411 1230 aaKnown RBP13.02□□□□□ -0.33
PRDM16-207ENST00000512462 NDUFAB1O14561 156 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 SHMT1P34896 483 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 GABPB1Q06547 395 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-207ENST00000512462 TRIP13Q15645 432 aaPredicted RBP13.02□□□□□ -0.33
PRDM16-207ENST00000512462 KRT71Q3SY84 523 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 PPP1R18Q6NYC8 613 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 TTC16Q8NEE8 873 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 WRNIP1Q96S55 665 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 LXNQ9BS40 222 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 KIFC3Q9BVG8 833 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 KCNK9Q9NPC2 374 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 ASIC3Q9UHC3 531 aa13.02□□□□□ -0.33
PRDM16-207ENST00000512462 CCDC151A5D8V7 595 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 CTIFO43310 598 aaKnown RBP13.01□□□□□ -0.33
PRDM16-207ENST00000512462 RNF40O75150 1001 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 SARSP49591 514 aaKnown RBP13.01□□□□□ -0.33
PRDM16-207ENST00000512462 CASP4P49662 377 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 CIAPIN1Q6FI81 312 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 GUF1Q8N442 669 aaKnown RBP13.01□□□□□ -0.33
PRDM16-207ENST00000512462 KIAA0895Q8NCT3 520 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 ANKRD7Q92527 254 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 SHISA4Q96DD7 197 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 AMFRQ9UKV5 643 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 WNK3Q9BYP7 1800 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 IFNB1P01574 187 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 TCP1P17987 556 aaKnown RBP13.01□□□□□ -0.33
PRDM16-207ENST00000512462 NPEPPSP55786 919 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 CATSPER3Q86XQ3 398 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 IFT20Q8IY31 132 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 OPA1O60313 960 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 TM4SF1P30408 202 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 PSMC2P35998 433 aaKnown RBP13.01□□□□□ -0.33
PRDM16-207ENST00000512462 CETN2P41208 172 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 NBPF9Q3BBW0 867 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 NAALADL2Q58DX5 795 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 WDR44Q5JSH3 913 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 KAZNQ674X7 775 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 PLA2G4FQ68DD2 849 aa13.01□□□□□ -0.33
PRDM16-207ENST00000512462 DDX47Q9H0S4 455 aaKnown RBP13.01□□□□□ -0.33
PRDM16-207ENST00000512462 GOLGA6L7A0A1B0GV03 622 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 BCRP11274 1271 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 TMOD1P28289 359 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 SLCO1A2P46721 670 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 LIG4P49917 911 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 HMGCS2P54868 508 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 MAP3K9P80192 1104 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 STRN3Q13033 797 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 TTI2Q6NXR4 508 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 TRIM65Q6PJ69 517 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 COG1Q8WTW3 980 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 PNKPQ96T60 521 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 CAPN11Q9UMQ6 739 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 GNA14O95837 355 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 KCNA1Q09470 495 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 TERF2Q15554 542 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 PADI6Q6TGC4 694 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 ZBTB33Q86T24 672 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 PASD1Q8IV76 773 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 NACC1Q96RE7 527 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 DNAJC12Q9UKB3 198 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 FHOD1Q9Y613 1164 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 CAPN6Q9Y6Q1 641 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 CD58P19256 250 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 HMGB2P26583 209 aaKnown RBP13□□□□□ -0.33
PRDM16-207ENST00000512462 POLGP54098 1239 aaPredicted RBP13□□□□□ -0.33
PRDM16-207ENST00000512462 KNOP1Q1ED39 458 aaKnown RBP13□□□□□ -0.33
PRDM16-207ENST00000512462 SEL1L2Q5TEA6 688 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 LRRC1Q9BTT6 524 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 JRKLQ9Y4A0 524 aa13□□□□□ -0.33
PRDM16-207ENST00000512462 SPEF2Q9C093 1822 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 MYL1P05976 194 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 ASNSP08243 561 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
PRDM16-207ENST00000512462 COPB2P35606 906 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 GNGT1P63211 74 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 MTMR1Q13613 665 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 MTMR2Q13614 643 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 KCNB1Q14721 858 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 STRIP1Q5VSL9 837 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 KBTBD4Q9NVX7 518 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 GEMIN8Q9NWZ8 242 aaKnown RBP12.99□□□□□ -0.33
PRDM16-207ENST00000512462 ADAM21Q9UKJ8 722 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 PVALEFA0A1B0GWK0 134 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 EPC2Q52LR7 807 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 C2CD6Q53TS8 623 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 CDKAL1Q5VV42 579 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
PRDM16-207ENST00000512462 MED15Q96RN5 788 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 PACSIN1Q9BY11 444 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 EBAG9O00559 213 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 EPHB6O15197 1021 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
PRDM16-207ENST00000512462 UAP1Q16222 522 aaPredicted RBP12.99□□□□□ -0.33
PRDM16-207ENST00000512462 E2F4Q16254 413 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms