RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 GRIK4Q16099 956 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 MARCH8Q5T0T0 291 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 CES5AQ6NT32 575 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 ENAHQ8N8S7 591 aaPredicted RBP13.36□□□□□ -0.27
RNF4-216ENST00000511859 TNPO1Q92973 898 aaKnown RBP13.36□□□□□ -0.27
RNF4-216ENST00000511859 SEMA4AQ9H3S1 761 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 RTEL1Q9NZ71 1219 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 PUF60Q9UHX1 559 aaKnown RBP13.36□□□□□ -0.27
RNF4-216ENST00000511859 PADI3Q9ULW8 664 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 LZTS1Q9Y250 596 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 NCOR2Q9Y618 2525 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 NEDD4P46934 1319 aa13.36□□□□□ -0.27
RNF4-216ENST00000511859 TCF7P36402 384 aaPredicted RBP13.35□□□□□ -0.27
RNF4-216ENST00000511859 SARSP49591 514 aaKnown RBP13.35□□□□□ -0.27
RNF4-216ENST00000511859 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
RNF4-216ENST00000511859 ITIH3Q06033 890 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 PAK2Q13177 524 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 ZNF589Q86UQ0 364 aaPredicted RBP13.35□□□□□ -0.27
RNF4-216ENST00000511859 THNSL1Q8IYQ7 743 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 SEPT1Q8WYJ6 367 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 NGRNQ9NPE2 291 aaKnown RBP13.35□□□□□ -0.27
RNF4-216ENST00000511859 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 ZSWIM5Q9P217 1185 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 FRMPD4Q14CM0 1322 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 IGSF9BQ9UPX0 1349 aa13.35□□□□□ -0.27
RNF4-216ENST00000511859 SP100P23497 879 aaPredicted RBP13.34□□□□□ -0.27
RNF4-216ENST00000511859 GATMP50440 423 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 PLCB3Q01970 1234 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 SP4Q02446 784 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 DGLUCYQ7Z3D6 616 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 NME8Q8N427 588 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 ADAM7Q9H2U9 754 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 SMARCAD1Q9H4L7 1026 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 TRPV2Q9Y5S1 764 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 CACNA1GO43497 2377 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 ACACBO00763 2458 aa13.34□□□□□ -0.27
RNF4-216ENST00000511859 C2CD4DB7Z1M9 353 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.27
RNF4-216ENST00000511859 PCNX4Q63HM2 1172 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 ZDHHC14Q8IZN3 488 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 COLGALT1Q8NBJ5 622 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 MRPS27Q92552 414 aaKnown RBP13.33□□□□□ -0.27
RNF4-216ENST00000511859 CASP10Q92851 521 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 GLG1Q92896 1179 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 CDHR1Q96JP9 859 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 TCF25Q9BQ70 676 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 APOL5Q9BWW9 433 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 CELF4Q9BZC1 486 aaKnown RBP13.33□□□□□ -0.27
RNF4-216ENST00000511859 RNF39Q9H2S5 420 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 RIOX1Q9H6W3 641 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 TYW1Q9NV66 732 aaKnown RBP13.33□□□□□ -0.27
RNF4-216ENST00000511859 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 TELO2Q9Y4R8 837 aa13.33□□□□□ -0.27
RNF4-216ENST00000511859 KDM3AQ9Y4C1 1321 aa13.33□□□□□ -0.28
RNF4-216ENST00000511859 PNMA6FA0A0J9YX94 578 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 GSTTP1A0A1W2PQM5 241 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
RNF4-216ENST00000511859 PALM3A6NDB9 673 aaPredicted RBP13.32□□□□□ -0.28
RNF4-216ENST00000511859 TBKBP1A7MCY6 615 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 B4E1Z4 1266 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 MARK3P27448 753 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 MTHFRP42898 656 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
RNF4-216ENST00000511859 ODR4Q5SWX8 454 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 PLPP4Q5VZY2 271 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 LLGL2Q6P1M3 1020 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 SLC24A5Q71RS6 500 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 HOMER1Q86YM7 354 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 RMDN1Q96DB5 314 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 RTP3Q9BQQ7 232 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 UBAC1Q9BSL1 405 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 KRT23Q9C075 422 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 FAM49AQ9H0Q0 323 aaPredicted RBP13.32□□□□□ -0.28
RNF4-216ENST00000511859 TMX1Q9H3N1 280 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 POMKQ9H5K3 350 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 ENTPD7Q9NQZ7 604 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 C1orf112Q9NSG2 853 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
RNF4-216ENST00000511859 PCDHA2Q9Y5H9 948 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 OTOGLQ3ZCN5 2332 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 LMNAP02545 664 aaKnown RBP13.32□□□□□ -0.28
RNF4-216ENST00000511859 INSRRP14616 1297 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 LAG3P18627 525 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 AOC1P19801 751 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 IGBP1P78318 339 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 KRT17Q04695 432 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 NFX1Q12986 1120 aaKnown RBP13.32□□□□□ -0.28
RNF4-216ENST00000511859 PUM1Q14671 1186 aaKnown RBP eCLIP13.32□□□□□ -0.28
RNF4-216ENST00000511859 ANGPT1Q15389 498 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 KCNG4Q8TDN1 519 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 PIGSQ96S52 555 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 RGS18Q9NS28 235 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms