RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 TUBE1Q9UJT0 475 aa13.91□□□□□ -0.18
COPS4-210ENST00000511708 PADI3Q9ULW8 664 aa13.91□□□□□ -0.18
COPS4-210ENST00000511708 USTQ9Y2C2 406 aa13.91□□□□□ -0.18
COPS4-210ENST00000511708 SPATA31C2B4DYI2 1134 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 FGAP02671 866 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 HOXA13P31271 388 aaPredicted RBP13.9□□□□□ -0.18
COPS4-210ENST00000511708 SARSP49591 514 aaKnown RBP13.9□□□□□ -0.18
COPS4-210ENST00000511708 MRPS9P82933 396 aaKnown RBP13.9□□□□□ -0.18
COPS4-210ENST00000511708 PLCB3Q01970 1234 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 ST3GAL2Q16842 350 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 ASPRV1Q53RT3 343 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 DGKHQ86XP1 1220 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 DCLK2Q8N568 766 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 PNMA1Q8ND90 353 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 MRPS27Q92552 414 aaKnown RBP13.9□□□□□ -0.18
COPS4-210ENST00000511708 AMNQ9BXJ7 453 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 CWH43Q9H720 699 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 ERVK-5Q9HDB9 667 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 NGRNQ9NPE2 291 aaKnown RBP13.9□□□□□ -0.18
COPS4-210ENST00000511708 HCFC2Q9Y5Z7 792 aa13.9□□□□□ -0.18
COPS4-210ENST00000511708 IGSF9BQ9UPX0 1349 aa13.9□□□□□ -0.19
COPS4-210ENST00000511708 PKD1L2Q7Z442 2459 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
COPS4-210ENST00000511708 PPP1R11O60927 126 aaPredicted RBP13.89□□□□□ -0.19
COPS4-210ENST00000511708 RPLP2P05387 115 aaKnown RBP13.89□□□□□ -0.19
COPS4-210ENST00000511708 PPFIA1Q13136 1202 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 GRIK4Q16099 956 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 GNPTABQ3T906 1256 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
COPS4-210ENST00000511708 KIAA1841Q6NSI8 718 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 PI4K2BQ8TCG2 481 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 TCF25Q9BQ70 676 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 TYW1Q9NV66 732 aaKnown RBP13.89□□□□□ -0.19
COPS4-210ENST00000511708 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 ZMYM6O95789 1325 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 FRMPD4Q14CM0 1322 aa13.89□□□□□ -0.19
COPS4-210ENST00000511708 TBKBP1A7MCY6 615 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 STAM2O75886 525 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 PCP11498 1178 aaKnown RBP13.88□□□□□ -0.19
COPS4-210ENST00000511708 IER5Q5VY09 327 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 SENP7Q9BQF6 1050 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 ENTPD7Q9NQZ7 604 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 CYP26B1Q9NR63 512 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
COPS4-210ENST00000511708 DUSP12Q9UNI6 340 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 TRPV2Q9Y5S1 764 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 C2orf16Q68DN1 1984 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 TTC41PQ6P2S7 1318 aa13.88□□□□□ -0.19
COPS4-210ENST00000511708 FIBPO43427 364 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 MGEA5O60502 916 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 EOMESO95936 686 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 WEE2P0C1S8 567 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 MS4A1P11836 297 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 LAG3P18627 525 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 PAK2Q13177 524 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 TDGQ13569 410 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 FAM102BQ5T8I3 360 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 FAM43BQ6ZT52 329 aaPredicted RBP13.87□□□□□ -0.19
COPS4-210ENST00000511708 SIX5Q8N196 739 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 SUMF1Q8NBK3 374 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 HINFPQ9BQA5 517 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 ZKSCAN3Q9BRR0 538 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
COPS4-210ENST00000511708 PCDHB7Q9Y5E2 793 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 PCDHA1Q9Y5I3 950 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 KDM3AQ9Y4C1 1321 aa13.87□□□□□ -0.19
COPS4-210ENST00000511708 FASNP49327 2511 aaKnown RBP13.86□□□□□ -0.19
COPS4-210ENST00000511708 LAMA4Q16363 1823 aa13.86□□□□□ -0.19
COPS4-210ENST00000511708 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
COPS4-210ENST00000511708 TCF7P36402 384 aaPredicted RBP13.86□□□□□ -0.19
COPS4-210ENST00000511708 ATXN1P54253 815 aaKnown RBP13.86□□□□□ -0.19
COPS4-210ENST00000511708 ZC3H14Q6PJT7 736 aaKnown RBP13.86□□□□□ -0.19
COPS4-210ENST00000511708 MFSD6Q6ZSS7 791 aa13.86□□□□□ -0.19
COPS4-210ENST00000511708 TBC1D10CQ8IV04 446 aa13.86□□□□□ -0.19
COPS4-210ENST00000511708 MIER1Q8N108 512 aa13.86□□□□□ -0.19
COPS4-210ENST00000511708 MRPL43Q8N983 215 aaKnown RBP13.86□□□□□ -0.19
COPS4-210ENST00000511708 ZBTB10Q96DT7 871 aa13.86□□□□□ -0.19
COPS4-210ENST00000511708 FAM49AQ9H0Q0 323 aaPredicted RBP13.86□□□□□ -0.19
COPS4-210ENST00000511708 EVPLQ92817 2033 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 ANKRD11Q6UB99 2663 aaPredicted RBP13.85□□□□□ -0.19
COPS4-210ENST00000511708 C2orf71A6NGG8 1288 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 C9IYK1 514 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 GCOM1H8Y6P7 765 aaPredicted RBP13.85□□□□□ -0.19
COPS4-210ENST00000511708 CLASP2O75122 1294 aaKnown RBP13.85□□□□□ -0.19
COPS4-210ENST00000511708 PARP1P09874 1014 aaKnown RBP13.85□□□□□ -0.19
COPS4-210ENST00000511708 POLR2MP0CAP2 368 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 PDE4AP27815 886 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 HAND2P61296 217 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 SP4Q02446 784 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 ATAT1Q5SQI0 421 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 RARS2Q5T160 578 aaKnown RBP13.85□□□□□ -0.19
COPS4-210ENST00000511708 KIAA0319Q5VV43 1072 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 TMC7Q7Z402 723 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 FCHSD1Q86WN1 690 aa13.85□□□□□ -0.19
COPS4-210ENST00000511708 RIN2Q8WYP3 895 aaPredicted RBP13.85□□□□□ -0.19
COPS4-210ENST00000511708 CELF4Q9BZC1 486 aaKnown RBP13.85□□□□□ -0.19
COPS4-210ENST00000511708 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms