RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 STILQ15468 1287 aa4.89□□□□□ -1.63
SCAMP1-204ENST00000511551 TRIM68Q6AZZ1 485 aa4.89□□□□□ -1.63
SCAMP1-204ENST00000511551 KCNT2Q6UVM3 1135 aa4.89□□□□□ -1.63
SCAMP1-204ENST00000511551 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.89□□□□□ -1.63
SCAMP1-204ENST00000511551 MRVI1Q9Y6F6 885 aa4.89□□□□□ -1.63
SCAMP1-204ENST00000511551 TCRBV5S4A2TA0A5A2 114 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 FAM47E-STBD1D6RA91 191 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 RAMP2O60895 175 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 SOD2P04179 222 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 GRM7Q14831 915 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 NTRK3Q16288 839 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 WDR72Q3MJ13 1102 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 BTBD8Q5XKL5 378 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 STYK1Q6J9G0 422 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 DPY19L2P1Q6NXN4 242 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 GPR135Q8IZ08 494 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 IFNL3Q8IZI9 196 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 NLGN4XQ8N0W4 816 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 THEMISQ8N1K5 641 aaPredicted RBP4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 VOPP1Q96AW1 172 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 CLIP3Q96DZ5 547 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 WNK4Q96J92 1243 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 PARPBPQ9NWS1 579 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 GIT1Q9Y2X7 761 aa4.88□□□□□ -1.63
SCAMP1-204ENST00000511551 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 FAM90A27PA6NNH2 459 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 FOXN1O15353 648 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 GJB6O95452 261 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 HMGCRP04035 888 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 FGFR1P11362 822 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 PTPN1P18031 435 aaKnown RBP4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 IL13RA1P78552 427 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 HHEXQ03014 270 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 HSP90AA2PQ14568 343 aaPredicted RBP4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 SPTY2D1Q68D10 685 aaPredicted RBP4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 SGMS1Q86VZ5 419 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 SCUBE1Q8IWY4 988 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 SGSM3Q96HU1 749 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 CD244Q9BZW8 370 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 KIAA1683Q9H0B3 1180 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 GALNT8Q9NY28 637 aa4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 HECAQ9UBI9 543 aaPredicted RBP4.87□□□□□ -1.63
SCAMP1-204ENST00000511551 ETFBP38117 255 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 KCNQ1P51787 676 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 HGFACQ04756 655 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 OSBP2Q969R2 916 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 OR10A2Q9H208 303 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 IPPKQ9H8X2 491 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 INCENPQ9NQS7 918 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 SLC2A4RGQ9NR83 387 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 SRPK3Q9UPE1 567 aa4.86□□□□□ -1.63
SCAMP1-204ENST00000511551 CYP27B1O15528 508 aa4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 PDE6AP16499 860 aa4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 FBLP22087 321 aaKnown RBP4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 PTGS1P23219 599 aa4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 PCOLCEQ15113 449 aa4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 MPHOSPH9Q99550 1183 aa4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 BTBD2Q9BX70 525 aa4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 AGO3Q9H9G7 860 aaKnown RBP4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 ARHGAP28Q9P2N2 729 aa4.85□□□□□ -1.63
SCAMP1-204ENST00000511551 WNT9AO14904 365 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 PRODHO43272 600 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 SLC26A4O43511 780 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 SSBP05455 408 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 PABPC1P11940 636 aaKnown RBP4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 AOAHP28039 575 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 ADRA1BP35368 520 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 RRP1BQ14684 758 aaKnown RBP4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 GPR19Q15760 415 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 LRCH2Q5VUJ6 765 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 D2HGDHQ8N465 521 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 AARSD1Q9BTE6 412 aaKnown RBP4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 TTPALQ9BTX7 342 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 BTBD7Q9P203 1132 aa4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 REXO2Q9Y3B8 237 aaKnown RBP4.84□□□□□ -1.63
SCAMP1-204ENST00000511551 A0A0G2JNJ9 132 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 TMEM191CA6NGB0 347 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 CAPN14A8MX76 684 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 GJA4P35212 333 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 ADCY8P40145 1251 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 MRE11P49959 708 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 HERVK_113P62684 666 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 SLC25A3Q00325 362 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 KANK2Q63ZY3 851 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 TMEM200BQ69YZ2 307 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 NSMFQ6X4W1 530 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 ARHGAP36Q6ZRI8 547 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 FILIP1Q7Z7B0 1213 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 VPS37DQ86XT2 251 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 SHCBP1Q8NEM2 672 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 ALG1Q9BT22 464 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 CCSER2Q9H7U1 834 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 ARHGEF4Q9NR80 690 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 RIC8BQ9NVN3 520 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 GPRC5BQ9NZH0 403 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 Q9UFV3 132 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 CDC42EP3Q9UKI2 254 aa4.83□□□□□ -1.64
SCAMP1-204ENST00000511551 ASXL2Q76L83 1435 aa4.82□□□□□ -1.64
SCAMP1-204ENST00000511551 MAN2B1O00754 1011 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms