RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 PLD1Q13393 1074 aa5.34□□□□□ -1.56
PTPN13-209ENST00000511467 ZNF658Q5TYW1 1059 aaPredicted RBP5.34□□□□□ -1.56
PTPN13-209ENST00000511467 PALB2Q86YC2 1186 aa5.34□□□□□ -1.56
PTPN13-209ENST00000511467 IFNL3Q8IZI9 196 aa5.34□□□□□ -1.56
PTPN13-209ENST00000511467 ACRBPQ8NEB7 543 aa5.34□□□□□ -1.56
PTPN13-209ENST00000511467 CCDC97Q96F63 343 aaPredicted RBP5.34□□□□□ -1.56
PTPN13-209ENST00000511467 ZNF496Q96IT1 587 aaPredicted RBP5.34□□□□□ -1.56
PTPN13-209ENST00000511467 USP28Q96RU2 1077 aa5.34□□□□□ -1.56
PTPN13-209ENST00000511467 DACT1Q9NYF0 836 aa5.34□□□□□ -1.56
PTPN13-209ENST00000511467 OTOFQ9HC10 1997 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 E7EWF7 191 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SASH1O94885 1247 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 RXRGP48443 463 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SMARCB1Q12824 385 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 MYSM1Q5VVJ2 828 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 NLRP10Q86W26 655 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 VPS37AQ8NEZ2 397 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 NACA2Q9H009 215 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 C1orf115Q9H7X2 142 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 USTQ9Y2C2 406 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 MYPNQ86TC9 1320 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ZNF532Q9HCE3 1301 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ICE1Q9Y2F5 2266 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 GTPBP10A4D1E9 387 aaKnown RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 MCF2LO15068 1137 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ZNF500O60304 480 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 BRD1O95696 1058 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ACTN1P12814 892 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ACADSBP45954 432 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 POLGP54098 1239 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 UGP2Q16851 508 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SAMD1Q6SPF0 538 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ABI1Q8IZP0 508 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 MIPOL1Q8TD10 442 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 TTC17Q96AE7 1141 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 VEZTQ9HBM0 779 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 MPP6Q9NZW5 540 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 PIM2Q9P1W9 311 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 DNPEPQ9ULA0 475 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 QSER1Q2KHR3 1735 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 FAM177BA6PVY3 158 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 BMP3P12645 472 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 LIG4P49917 911 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SEPT6Q14141 434 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 RABL6Q3YEC7 729 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 NIPA1Q7RTP0 329 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 MIER3Q7Z3K6 550 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 TRIM50Q86XT4 487 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 CCNJLQ8IV13 435 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ACAP3Q96P50 834 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 FAM193BQ96PV7 902 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 UIMC1Q96RL1 719 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ANAPC5Q9UJX4 755 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 CCDC78A2IDD5 438 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 A6NJR5 290 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 RPN1P04843 607 aaKnown RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 TGFB2P61812 414 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 GPSM2P81274 684 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ADCY2Q08462 1091 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SNX17Q15036 470 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ARHGEF18Q6ZSZ5 1173 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 FBXO41Q8TF61 875 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 RSAD2Q8WXG1 361 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 RBSNQ9H1K0 784 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 EHD4Q9H223 541 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 CLUHO75153 1309 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SALL1Q9NSC2 1324 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 CRCPO75575 148 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 GCNT3O95395 438 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 S100BP04271 92 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 TKTP29401 623 aaKnown RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ZBTB17Q13105 803 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 EDRF1Q3B7T1 1238 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ATG16L1Q676U5 607 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 FRMD5Q7Z6J6 570 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 EIF1ADQ8N9N8 165 aaKnown RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 C8orf58Q8NAV2 365 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ENOX1Q8TC92 643 aaKnown RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SNX29Q8TEQ0 813 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 LARP4BQ92615 738 aaKnown RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 NT5C1BQ96P26 610 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 NUF2Q9BZD4 464 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 USP44Q9H0E7 712 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 H3BQF6 201 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 CD4P01730 458 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SERPING1P05155 500 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 GPTP24298 496 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 IRF5Q13568 498 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 SF3B3Q15393 1217 aaKnown RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 LRCH2Q5VUJ6 765 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 MFSD14CQ5VZR4 134 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 ITPRIPL1Q6GPH6 555 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 CPLX4Q7Z7G2 160 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 LRRC8CQ8TDW0 803 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 VPS39Q96JC1 886 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 GPBP1L1Q9HC44 474 aaPredicted RBP5.33□□□□□ -1.56
PTPN13-209ENST00000511467 RAB20Q9NX57 234 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 PCDHA1Q9Y5I3 950 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 C4AP0C0L4 1744 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms