RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TEPPQ6URK8 271 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 MIB1Q86YT6 1006 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 FAM26EQ8N5C1 309 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 COG1Q8WTW3 980 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 MTMR8Q96EF0 704 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 GBP4Q96PP9 640 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 SGPP1Q9BX95 441 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 GCM1Q9NP62 436 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 NGRNQ9NPE2 291 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 PHLDB1Q86UU1 1377 aa4.65□□□□□ -1.66
TRAPPC11-207ENST00000511409 TGM5O43548 720 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 LRG1P02750 347 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 PDGFRBP09619 1106 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 ZSCAN22P10073 491 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 LSP1P33241 339 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 SESN3P58005 492 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 DLG4P78352 724 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 CACNB2Q08289 660 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 BRDTQ58F21 947 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 CATSPEREQ5SY80 951 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 TMC5Q6UXY8 1006 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 NECAB2Q7Z6G3 386 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 LDHDQ86WU2 507 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 ZZZ3Q8IYH5 903 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 KCNN1Q92952 543 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 SMAD5Q99717 465 aaKnown RBP4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 PUS7LQ9H0K6 701 aaKnown RBP4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 CNTD2Q9H8S5 307 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 SLC39A2Q9NP94 309 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 RBPJLQ9UBG7 517 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 MBD1Q9UIS9 605 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 NOC2LQ9Y3T9 749 aaKnown RBP4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 WASHC2CQ9Y4E1 1318 aa4.65□□□□□ -1.67
TRAPPC11-207ENST00000511409 PRAMEF22A3QJZ6 481 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 TCAF2A6NFQ2 919 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 RASSF10A6NK89 507 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 PRKD3O94806 890 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 APOL3O95236 402 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 CYP2C8P10632 490 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 CD40P25942 277 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 SDHAP31040 664 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 FNTBP49356 437 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 CDR1P51861 262 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 SMAD3P84022 425 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 DBPQ10586 325 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 MTMR1Q13613 665 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 TERF2Q15554 542 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 SMAD2Q15796 467 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 KCNA10Q16322 511 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 PRAMEF18Q5VWM3 479 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 CD276Q5ZPR3 534 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 VASNQ6EMK4 673 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 ESRP1Q6NXG1 681 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 ATG14Q6ZNE5 492 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 STK32CQ86UX6 486 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 CNTD1Q8N815 330 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 CLRN3Q8NCR9 226 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 WDR48Q8TAF3 677 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 SMARCC2Q8TAQ2 1214 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 MZB1Q8WU39 189 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 STAG1Q8WVM7 1258 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 ASB15Q8WXK1 588 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 RTF1Q92541 710 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 AHCYL2Q96HN2 611 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 RNF38Q9H0F5 515 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 CCDC8Q9H0W5 538 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 MS4A5Q9H3V2 200 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 VTA1Q9NP79 307 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 TYW1Q9NV66 732 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 UCKL1Q9NWZ5 548 aa4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 SMG5Q9UPR3 1016 aaKnown RBP4.64□□□□□ -1.67
TRAPPC11-207ENST00000511409 UBA6A0AVT1 1052 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 LCHNA4D1U4 455 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 KDM1AO60341 852 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 S100BP04271 92 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 C8BP07358 591 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 ENO2P09104 434 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 MC4RP32245 332 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 SCAND1P57086 179 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 HERVK_113P62684 666 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 EXOSC10Q01780 885 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 PFKPQ01813 784 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 FAPQ12884 760 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 CR1LQ2VPA4 569 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 RASSF3Q86WH2 238 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 NME9Q86XW9 330 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 C7orf31Q8N865 590 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 ZNF610Q8N9Z0 462 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 CPA5Q8WXQ8 436 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 E2F7Q96AV8 911 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 ZSWIM3Q96MP5 696 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 TUBGCP5Q96RT8 1024 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 SYT3Q9BQG1 590 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 PDGFDQ9GZP0 370 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 KCNG1Q9UIX4 513 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 MSRAQ9UJ68 235 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 TRHDEQ9UKU6 1024 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 ASB1Q9Y576 335 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 PCDHA5Q9Y5H7 936 aa4.63□□□□□ -1.67
TRAPPC11-207ENST00000511409 WASHC2AQ641Q2 1341 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms