RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CBX2Q14781 532 aaPredicted RBP7.62□□□□□ -1.19
GYPB-212ENST00000511198 LCE4AQ5TA78 99 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 VHLLQ6RSH7 139 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 ZNF622Q969S3 477 aaKnown RBP eCLIP7.62□□□□□ -1.19
GYPB-212ENST00000511198 ANAPC16Q96DE5 110 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 GLIS2Q9BZE0 524 aaPredicted RBP7.62□□□□□ -1.19
GYPB-212ENST00000511198 MTMR10Q9NXD2 777 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 NRXN2Q9P2S2 1712 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 PRUNE2Q8WUY3 3088 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 MYH14Q7Z406 1995 aaKnown RBP7.61□□□□□ -1.19
GYPB-212ENST00000511198 NUDT19A8MXV4 375 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 FZD9O00144 591 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 TBC1D8O95759 1140 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 SSPNQ14714 243 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 RAB3GAP1Q15042 981 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 RPTNQ6XPR3 784 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 JAMLQ86YT9 394 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 GPC2Q8N158 579 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 IRF2BPLQ9H1B7 796 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 ZNF408Q9H9D4 720 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 APEX2Q9UBZ4 518 aa7.61□□□□□ -1.19
GYPB-212ENST00000511198 CACNA1SQ13698 1873 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 ANKRD34BA5PLL1 514 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 STXBP3O00186 592 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 N4BP3O15049 544 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 TCF3P15923 654 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 CDR1P51861 262 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 GRB10Q13322 594 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 DPY19L1Q2PZI1 675 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 LCE1DQ5T752 114 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 EEF1DP3Q658K8 133 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 RGMBQ6NW40 437 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 DLK2Q6UY11 383 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 IP6K1Q92551 441 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 CNOT6Q9ULM6 557 aaKnown RBP7.6□□□□□ -1.19
GYPB-212ENST00000511198 KCTD3Q9Y597 815 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 PIEZO1Q92508 2521 aa7.6□□□□□ -1.19
GYPB-212ENST00000511198 KDRP35968 1356 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 SLX4Q8IY92 1834 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 TTC21AQ8NDW8 1320 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 A0A1W2PQ27 194 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 A0A1W2PQ64 194 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 A0A1W2PQC6 194 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 A0A1W2PQD8 194 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 SERPINB2P05120 415 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 L1CAMP32004 1257 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 CORO7P57737 925 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 MAP3K12Q12852 859 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 NFIXQ14938 502 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 OLFML2BQ68BL8 750 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 USP50Q70EL3 339 aaPredicted RBP7.59□□□□□ -1.19
GYPB-212ENST00000511198 TMC6Q7Z403 805 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 CAPN10Q9HC96 672 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 PDLIM7Q9NR12 457 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 ZNF277Q9NRM2 450 aaPredicted RBP7.59□□□□□ -1.19
GYPB-212ENST00000511198 MRVI1Q9Y6F6 885 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 CD163L1Q9NR16 1453 aa7.59□□□□□ -1.19
GYPB-212ENST00000511198 SMG6Q86US8 1419 aaKnown RBP7.59□□□□□ -1.19
GYPB-212ENST00000511198 COL5A3P25940 1745 aaPredicted RBP7.58□□□□□ -1.2
GYPB-212ENST00000511198 C2orf71A6NGG8 1288 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 IRS4O14654 1257 aaPredicted RBP7.58□□□□□ -1.2
GYPB-212ENST00000511198 SMAD7O15105 426 aaKnown RBP7.58□□□□□ -1.2
GYPB-212ENST00000511198 SRGAP3O43295 1099 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 DBHP09172 617 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 AMPD2Q01433 879 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 TMEM62Q0P6H9 643 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 NR1I3Q14994 352 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 NBPF6Q5VWK0 638 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 MZB1Q8WU39 189 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 SIGLEC10Q96LC7 697 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 NBPF4Q96M43 638 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 EPB41L4AQ9HCS5 686 aaPredicted RBP7.58□□□□□ -1.2
GYPB-212ENST00000511198 SUGT1Q9Y2Z0 365 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 EMC9Q9Y3B6 208 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 BACE2Q9Y5Z0 518 aa7.58□□□□□ -1.2
GYPB-212ENST00000511198 CGNL1Q0VF96 1302 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 MAP3K19Q56UN5 1328 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 PCDH11XQ9BZA7 1347 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 PCDH11YQ9BZA8 1340 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 MAPKAPK2P49137 400 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 ZNF143P52747 638 aaPredicted RBP7.57□□□□□ -1.2
GYPB-212ENST00000511198 PLEKHN1Q494U1 663 aaPredicted RBP7.57□□□□□ -1.2
GYPB-212ENST00000511198 ZNF385BQ569K4 471 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 VPS37DQ86XT2 251 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 IGDCC3Q8IVU1 814 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 TMEFF1Q8IYR6 380 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 APBA2Q99767 749 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 PGAP2Q9UHJ9 254 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 AKT3Q9Y243 479 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 PCDHA5Q9Y5H7 936 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 IRAK3Q9Y616 596 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 COL11A2P13942 1736 aaPredicted RBP7.57□□□□□ -1.2
GYPB-212ENST00000511198 ANKRD31Q8N7Z5 1873 aa7.57□□□□□ -1.2
GYPB-212ENST00000511198 IRS2Q9Y4H2 1338 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 A0A1W2PPC1 479 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 PPP1R11O60927 126 aaPredicted RBP7.56□□□□□ -1.2
GYPB-212ENST00000511198 CYBBP04839 570 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 PI3P19957 117 aa7.56□□□□□ -1.2
GYPB-212ENST00000511198 SEPHS1P49903 392 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms