RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 TTC26A0AVF1 554 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 GLTPD2A6NH11 291 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 MYCLP12524 364 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-205ENST00000509860 HOXA7P31268 230 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-205ENST00000509860 KSR1Q8IVT5 923 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 PPP1R2P41236 205 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 CNTN2Q02246 1040 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 CCDC65Q8IXS2 484 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 BRCA2P51587 3418 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 ABL1P00519 1130 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 SH2D3AQ9BRG2 576 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 DESI2Q9BSY9 194 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 MRPL44Q9H9J2 332 aaKnown RBP13.81□□□□□ -0.2
PRDM16-205ENST00000509860 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 MCM3APO60318 1980 aa13.81□□□□□ -0.2
PRDM16-205ENST00000509860 LOC102724159A0A0B4J2E5 919 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 TGFB1I1O43294 461 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 STX10O60499 249 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 NR3C2P08235 984 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 MUTP22033 750 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 PPATQ06203 517 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 PWP2Q15269 919 aaKnown RBP13.8□□□□□ -0.2
PRDM16-205ENST00000509860 ARHGEF16Q5VV41 709 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
PRDM16-205ENST00000509860 PLXNA1Q9UIW2 1896 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 MARSP56192 900 aaKnown RBP13.8□□□□□ -0.2
PRDM16-205ENST00000509860 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 ZC2HC1CQ53FD0 456 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-205ENST00000509860 CCDC112Q8NEF3 446 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 OLFML3Q9NRN5 406 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 PLXNB2O15031 1838 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 TRAF5O00463 557 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 DYNC1I1O14576 645 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 PPP1R37O75864 691 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 PRPF6O94906 941 aaKnown RBP13.8□□□□□ -0.2
PRDM16-205ENST00000509860 NMT1P30419 496 aaKnown RBP13.8□□□□□ -0.2
PRDM16-205ENST00000509860 KCTD17Q8N5Z5 321 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 ZC3H15Q8WU90 426 aaKnown RBP13.8□□□□□ -0.2
PRDM16-205ENST00000509860 CCDC47Q96A33 483 aaKnown RBP13.8□□□□□ -0.2
PRDM16-205ENST00000509860 DNAJC7Q99615 494 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 ACAD9Q9H845 621 aa13.8□□□□□ -0.2
PRDM16-205ENST00000509860 PSEN1P49768 467 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 VWA3BQ502W6 1294 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 ERGIC2Q96RQ1 377 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 TRAF3IP3Q9Y228 551 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 REXO2Q9Y3B8 237 aaKnown RBP13.79□□□□□ -0.2
PRDM16-205ENST00000509860 ARHGAP6O43182 974 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 APBA1Q02410 837 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 SYCP1Q15431 976 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 LDLRAD1Q5T700 205 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 CHP1Q99653 195 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRDM16-205ENST00000509860 PPP2R2CQ9Y2T4 447 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 V9GYY5 206 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-205ENST00000509860 LYPLA2O95372 231 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 TNNT1P13805 278 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 Q3C1V9 767 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 FILIP1LQ4L180 1135 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 MIER3Q7Z3K6 550 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 PROCA1Q8NCQ7 364 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-205ENST00000509860 OPTNQ96CV9 577 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 BORCS6Q96GS4 357 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 SENP7Q9BQF6 1050 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
PRDM16-205ENST00000509860 CAPN11Q9UMQ6 739 aa13.79□□□□□ -0.2
PRDM16-205ENST00000509860 TESPA1A2RU30 521 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-205ENST00000509860 SOWAHBA6NEL2 793 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 BACH1O14867 736 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 ZNF862O60290 1169 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 RARRES1P49788 294 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
PRDM16-205ENST00000509860 SOCS7O14512 581 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 NOL4O94818 638 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 IREB2P48200 963 aaKnown RBP13.78□□□□□ -0.2
PRDM16-205ENST00000509860 PLS1Q14651 629 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 RIOX2Q8IUF8 465 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 TRIM59Q8IWR1 403 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 NACC1Q96RE7 527 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 NDST4Q9H3R1 872 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 CSADQ9Y600 493 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 PPP1R12BO60237 982 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-205ENST00000509860 CCND2P30279 289 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 DNM2P50570 870 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 GADL1Q6ZQY3 521 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 ANO5Q75V66 913 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 ANKRD13AQ8IZ07 590 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 RBPJLQ9UBG7 517 aa13.78□□□□□ -0.2
PRDM16-205ENST00000509860 SPATA31C2B4DYI2 1134 aa13.77□□□□□ -0.2
PRDM16-205ENST00000509860 P4HBP07237 508 aaKnown RBP13.77□□□□□ -0.2
PRDM16-205ENST00000509860 PPIL2Q13356 520 aa13.77□□□□□ -0.2
PRDM16-205ENST00000509860 KNOP1Q1ED39 458 aaKnown RBP13.77□□□□□ -0.2
PRDM16-205ENST00000509860 GPRASP2Q96D09 838 aa13.77□□□□□ -0.2
PRDM16-205ENST00000509860 DBR1Q9UK59 544 aaKnown RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms