RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CEP131Q9UPN4 1083 aa21.1■□□□□ 0.97
UBE3D-207ENST00000509102 PCDHA2Q9Y5H9 948 aa21.1■□□□□ 0.97
UBE3D-207ENST00000509102 CDH23Q9H251 3354 aa21.1■□□□□ 0.97
UBE3D-207ENST00000509102 CHRNA1P02708 482 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 GHRP10912 638 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 SFNP31947 248 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 MRPS6P82932 125 aaKnown RBP21.09■□□□□ 0.97
UBE3D-207ENST00000509102 ZNF484Q5JVG2 852 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 LRCH2Q5VUJ6 765 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 MOXD1Q6UVY6 613 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 NME8Q8N427 588 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 LENG9Q96B70 501 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 FAM167AQ96KS9 214 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 KCNJ14Q9UNX9 436 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 INSL6Q9Y581 213 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 CDY2AQ9Y6F7 541 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 CHD9Q3L8U1 2897 aa21.09■□□□□ 0.97
UBE3D-207ENST00000509102 SMIM35A0A1B0GVV1 85 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 MSH4O15457 936 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 GTPBP6O43824 516 aaPredicted RBP21.08■□□□□ 0.97
UBE3D-207ENST00000509102 JAK3P52333 1124 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 TCTN1Q2MV58 587 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 Q4G0T1 1027 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 FAM117BQ6P1L5 589 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 MTHFD1LQ6UB35 978 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 USP38Q8NB14 1042 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 TRAPPC12Q8WVT3 735 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 BBXQ8WY36 941 aaPredicted RBP21.08■□□□□ 0.97
UBE3D-207ENST00000509102 GTF3C6Q969F1 213 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 NAP1L4Q99733 375 aaKnown RBP21.08■□□□□ 0.97
UBE3D-207ENST00000509102 PHF20Q9BVI0 1012 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 DISC1Q9NRI5 854 aa21.08■□□□□ 0.97
UBE3D-207ENST00000509102 MAFBQ9Y5Q3 323 aaPredicted RBP21.08■□□□□ 0.97
UBE3D-207ENST00000509102 M0R2N6 131 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 KLRC1P26715 233 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 TAP1Q03518 808 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 MGAT3Q09327 533 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 TRIM29Q14134 588 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.96
UBE3D-207ENST00000509102 TSHZ1Q6ZSZ6 1077 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 TMCO2Q7Z6W1 182 aaPredicted RBP21.07■□□□□ 0.96
UBE3D-207ENST00000509102 NECAB1Q8N987 351 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 ARNTL2Q8WYA1 636 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 SLC5A5Q92911 643 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 GABBR1Q9UBS5 961 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 TRPV2Q9Y5S1 764 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 SQORQ9Y6N5 450 aa21.07■□□□□ 0.96
UBE3D-207ENST00000509102 CYP3A7-CYP3A51PA0A087WV96 503 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 CHMP2AO43633 222 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 SEC24BO95487 1268 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 CYP3A7P24462 503 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 ME3Q16798 604 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 INF2Q27J81 1249 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 LETM2Q2VYF4 491 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 RDM1Q8NG50 284 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 PPM1EQ8WY54 764 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 YME1L1Q96TA2 773 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 CERS4Q9HA82 394 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 NRBP2Q9NSY0 501 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 DDX25Q9UHL0 483 aaKnown RBP21.06■□□□□ 0.96
UBE3D-207ENST00000509102 MYO9BQ13459 2157 aa21.06■□□□□ 0.96
UBE3D-207ENST00000509102 TDP2O95551 362 aa21.05■□□□□ 0.96
UBE3D-207ENST00000509102 GCFC2P16383 781 aaKnown RBP21.05■□□□□ 0.96
UBE3D-207ENST00000509102 LPIN1Q14693 890 aa21.05■□□□□ 0.96
UBE3D-207ENST00000509102 NPY5RQ15761 445 aa21.05■□□□□ 0.96
UBE3D-207ENST00000509102 FBXO47Q5MNV8 452 aa21.05■□□□□ 0.96
UBE3D-207ENST00000509102 TRMT1LQ7Z2T5 733 aaKnown RBP21.05■□□□□ 0.96
UBE3D-207ENST00000509102 NEK8Q86SG6 692 aa21.05■□□□□ 0.96
UBE3D-207ENST00000509102 ZBTB10Q96DT7 871 aa21.05■□□□□ 0.96
UBE3D-207ENST00000509102 TSPYL2Q9H2G4 693 aaPredicted RBP21.05■□□□□ 0.96
UBE3D-207ENST00000509102 MICAL3Q7RTP6 2002 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 MARCH6O60337 910 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 UPP2O95045 317 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 CTDNEP1O95476 244 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 KRT2P35908 639 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 TMEM62Q0P6H9 643 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 ADGRE1Q14246 886 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 ODR4Q5SWX8 454 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 MIER3Q7Z3K6 550 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 TOP1MTQ969P6 601 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 TGS1Q96RS0 853 aaKnown RBP21.04■□□□□ 0.96
UBE3D-207ENST00000509102 FTHL17Q9BXU8 183 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 CELF4Q9BZC1 486 aaKnown RBP21.04■□□□□ 0.96
UBE3D-207ENST00000509102 IGSF9BQ9UPX0 1349 aa21.04■□□□□ 0.96
UBE3D-207ENST00000509102 LCHNA4D1U4 455 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 MAGEB2O15479 319 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 OATP04181 439 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 TMOD1P28289 359 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 PAK2Q13177 524 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 MKRN4PQ13434 485 aaPredicted RBP21.03■□□□□ 0.96
UBE3D-207ENST00000509102 FAM43BQ6ZT52 329 aaPredicted RBP21.03■□□□□ 0.96
UBE3D-207ENST00000509102 PIK3AP1Q6ZUJ8 805 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 MICALL1Q8N3F8 863 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 METTL13Q8N6R0 699 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 UNC45AQ9H3U1 944 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 LIMCH1Q9UPQ0 1083 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 GINS2Q9Y248 185 aa21.03■□□□□ 0.96
UBE3D-207ENST00000509102 CCNT1O60563 726 aaKnown RBP21.02■□□□□ 0.96
UBE3D-207ENST00000509102 PSMD10O75832 226 aa21.02■□□□□ 0.96
UBE3D-207ENST00000509102 HTRA4P83105 476 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms