RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 KPNB1Q14974 876 aaKnown RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 GSTA3Q16772 222 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 CCDC92Q53HC0 331 aaPredicted RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 SEPT14Q6ZU15 432 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 CROCCP2Q86T23 111 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 TAF4BQ92750 862 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 INPP5DQ92835 1189 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 USP20Q9Y2K6 914 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 PCDH11XQ9BZA7 1347 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 DCCP43146 1447 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 IFNAR1P17181 557 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 ATF3P18847 181 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 CYP11B2P19099 503 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 RASA1P20936 1047 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 SLC1A4P43007 532 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 ASTE1Q2TB18 679 aaPredicted RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 CYB5R4Q7L1T6 521 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 ZC3H18Q86VM9 953 aaKnown RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 ZSCAN29Q8IWY8 852 aaPredicted RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 ACTRT1Q8TDG2 376 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 LRRC8CQ8TDW0 803 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 LENG1Q96BZ8 264 aaPredicted RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 CENPKQ9BS16 269 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 STMN4Q9H169 189 aaPredicted RBP10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 DPH5Q9H2P9 285 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 UNC45AQ9H3U1 944 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 AZI2Q9H6S1 392 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 CABP5Q9NP86 173 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 ACEP12821 1306 aa10.87□□□□□ -0.67
PDGFRA-207ENST00000509092 TCP11X1B4DZS4 312 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 H0Y3Z8 333 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 CCDC188H7C350 402 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 RBAK-RBAKDNI3L0D1 243 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 ASLP04424 464 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 CYP1A1P04798 512 aaPredicted RBP10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 PAX3P23760 479 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 EHHADHQ08426 723 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 NAB2Q15742 525 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 KBTBD12Q3ZCT8 623 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 C6orf118Q5T5N4 469 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 TTI2Q6NXR4 508 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 PI16Q6UXB8 463 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 CCDC80Q76M96 950 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 TMEM87BQ96K49 555 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 RMDN2Q96LZ7 410 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 NR1H4Q96RI1 486 aaPredicted RBP10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 SLITRK6Q9H5Y7 841 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 INTUQ9ULD6 942 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 ATP8A1Q9Y2Q0 1164 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 CHD4Q14839 1912 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 LTBP4Q8N2S1 1624 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 NID2Q14112 1375 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 PNPLA7Q6ZV29 1317 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 SSU72P8A0A1W2PR75 194 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 PSMA7O14818 248 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 DDX58O95786 925 aaKnown RBP10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 ITGA2BP08514 1039 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 ACVR2BQ13705 512 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 PROSER3Q2NL68 480 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 MIIPQ5JXC2 388 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 MFSD4BQ5TF39 518 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 TRIM22Q8IYM9 498 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 LRRC43Q8N309 656 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 FMO2Q99518 471 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 CORO1BQ9BR76 489 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 EPB41L4BQ9H329 900 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 LUC7LQ9NQ29 371 aaKnown RBP10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 BARX2Q9UMQ3 279 aaPredicted RBP10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 TMEM98Q9Y2Y6 226 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 SH3GLB1Q9Y371 365 aa10.86□□□□□ -0.67
PDGFRA-207ENST00000509092 NFAT5O94916 1531 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 GFPT2O94808 682 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 SPATA31D3P0C874 917 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 IDO1P14902 403 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 ITGA6P23229 1130 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 MTIF2P46199 727 aaKnown RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 IFI35P80217 286 aaPredicted RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 RNASELQ05823 741 aaKnown RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 GFPT1Q06210 699 aaPredicted RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 MAP7Q14244 749 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 LIN52Q52LA3 116 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 ESCO1Q5FWF5 840 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 DENND2CQ68D51 928 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 SPATA31D4Q6ZUB0 917 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 NCCRP1Q6ZVX7 275 aaPredicted RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 TAOK1Q7L7X3 1001 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 SGMS1Q86VZ5 419 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 TTC8Q8TAM2 541 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 NEK9Q8TD19 979 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 OXER1Q8TDS5 423 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 SCG3Q8WXD2 468 aaKnown RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 CNOT6LQ96LI5 555 aaKnown RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 OLFM3Q96PB7 478 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 NOC4LQ9BVI4 516 aaKnown RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 AIPL1Q9NZN9 384 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 KLHL14Q9P2G3 628 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms