RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TBCKQ8TEA7 893 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 GJA10Q969M2 543 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 IFIH1Q9BYX4 1025 aaKnown RBP16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 ZNF302Q9NR11 478 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 PCDHA4Q9UN74 947 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 KCNJ14Q9UNX9 436 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 EVPLQ92817 2033 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 MBLAC1A4D2B0 266 aaPredicted RBP16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 RRN3P2A6NIE6 340 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 ANAPC15P60006 121 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 FAM26DQ5JW98 314 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 PDXDC2PQ6P474 469 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 CKAP2LQ8IYA6 745 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 BLIDQ8IZY5 108 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 NECAB1Q8N987 351 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 TBC1D22BQ9NU19 505 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 SAMM50Q9Y512 469 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 CDY2AQ9Y6F7 541 aa16.79■□□□□ 0.28
UBE2D3-228ENST00000508974 NLRC5Q86WI3 1866 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 IGKV6D-21A0A0A0MT36 114 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 CHMP2AO43633 222 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 EDIL3O43854 480 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 PFKFB2O60825 505 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 CDKL5O76039 1030 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 LARGE1O95461 756 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 CIITAP33076 1130 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 MRPS6P82932 125 aaKnown RBP16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 MGAT3Q09327 533 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 LPIN1Q14693 890 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 KRT40Q6A162 431 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 LENG9Q96B70 501 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 RAD9AQ99638 391 aa16.78■□□□□ 0.28
UBE2D3-228ENST00000508974 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.77■□□□□ 0.28
UBE2D3-228ENST00000508974 MSH4O15457 936 aa16.77■□□□□ 0.28
UBE2D3-228ENST00000508974 TDP2O95551 362 aa16.77■□□□□ 0.28
UBE2D3-228ENST00000508974 MTHFD1LQ6UB35 978 aa16.77■□□□□ 0.28
UBE2D3-228ENST00000508974 ATP8B4Q8TF62 1192 aa16.77■□□□□ 0.28
UBE2D3-228ENST00000508974 GDPD5Q8WTR4 605 aa16.77■□□□□ 0.28
UBE2D3-228ENST00000508974 TNPO1Q92973 898 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-228ENST00000508974 GABBR1Q9UBS5 961 aa16.77■□□□□ 0.28
UBE2D3-228ENST00000508974 LINC01553A4QN01 128 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 M0QZ92 97 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 CTDNEP1O95476 244 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 PSAPP07602 524 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 ATP4AP20648 1035 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 KLRC1P26715 233 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 CD52P31358 61 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 SLC26A2P50443 739 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 USP11P51784 963 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 NEK4P51957 841 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 FOSBP53539 338 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 KRT76Q01546 638 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 ANKRD1Q15327 319 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 NPY5RQ15761 445 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 FBXO47Q5MNV8 452 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 ZNF746Q6NUN9 644 aaPredicted RBP16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 RPAINQ86UA6 219 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 APBB2Q92870 758 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 PPP1R16BQ96T49 567 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 GINS2Q9Y248 185 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 PCDHA2Q9Y5H9 948 aa16.76■□□□□ 0.27
UBE2D3-228ENST00000508974 VCANP13611 3396 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 STK36Q9NRP7 1315 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 M0R2N6 131 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 HBP1O60381 514 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 GAS7O60861 476 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 IBSPP21815 317 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 GRB10Q13322 594 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 NONOQ15233 471 aaKnown RBP eCLIP16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 ME3Q16798 604 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 INF2Q27J81 1249 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 LRCH2Q5VUJ6 765 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 IER5Q5VY09 327 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 DAGLBQ8NCG7 672 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 YME1L1Q96TA2 773 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 PHF20Q9BVI0 1012 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 AGO3Q9H9G7 860 aaKnown RBP16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 ORC3Q9UBD5 711 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 INSL6Q9Y581 213 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 PCDHA10Q9Y5I2 948 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 TRPV2Q9Y5S1 764 aa16.75■□□□□ 0.27
UBE2D3-228ENST00000508974 PRRC2BQ5JSZ5 2229 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 WDR64B1ANS9 1081 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 GTPBP6O43824 516 aaPredicted RBP16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 SKIV2LQ15477 1246 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 LETM2Q2VYF4 491 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 TSHZ1Q6ZSZ6 1077 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 SLC5A5Q92911 643 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 TOP1MTQ969P6 601 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 TGS1Q96RS0 853 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 C17orf80Q9BSJ5 609 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 TEKT3Q9BXF9 490 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 COL25A1Q9BXS0 654 aaPredicted RBP16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 C22orf23Q9BZE7 217 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 UNC45AQ9H3U1 944 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
UBE2D3-228ENST00000508974 MAFBQ9Y5Q3 323 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms