RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 PPP2R5CQ13362 524 aa16.52■□□□□ 0.24
SH3TC1-216ENST00000508641 NBR1Q14596 966 aa16.52■□□□□ 0.24
SH3TC1-216ENST00000508641 NCAPH2Q6IBW4 605 aa16.52■□□□□ 0.24
SH3TC1-216ENST00000508641 LRRC8DQ7L1W4 858 aa16.52■□□□□ 0.24
SH3TC1-216ENST00000508641 RPUSD2Q8IZ73 545 aaKnown RBP16.52■□□□□ 0.24
SH3TC1-216ENST00000508641 RDM1Q8NG50 284 aa16.52■□□□□ 0.24
SH3TC1-216ENST00000508641 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.52■□□□□ 0.244e-7■■■■■ 28.1
SH3TC1-216ENST00000508641 TMEM60Q9H2L4 133 aa16.52■□□□□ 0.24
SH3TC1-216ENST00000508641 PCDHA12Q9UN75 941 aa16.52■□□□□ 0.24
SH3TC1-216ENST00000508641 WDR81Q562E7 1941 aa16.52■□□□□ 0.23
SH3TC1-216ENST00000508641 ZNF862O60290 1169 aa16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 CTSHP09668 335 aa16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 TRAPPC10P48553 1259 aa16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 TOB1P50616 345 aaPredicted RBP16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 ZNF484Q5JVG2 852 aa16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 TMEM240Q5SV17 173 aa16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 BANK1Q8NDB2 785 aa16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 BBXQ8WY36 941 aaPredicted RBP16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 INTS4Q96HW7 963 aaKnown RBP16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 MTMR9Q96QG7 549 aa16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 FAM49AQ9H0Q0 323 aaPredicted RBP16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 TTC12Q9H892 705 aaPredicted RBP16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 NRBP2Q9NSY0 501 aa16.51■□□□□ 0.23
SH3TC1-216ENST00000508641 IGSF9BQ9UPX0 1349 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 MBLAC1A4D2B0 266 aaPredicted RBP16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 RSPH10B2B2RC85 870 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 FGBP02675 491 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 OATP04181 439 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 RSPH10BP0C881 870 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 PDCP20941 246 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 KLRC1P26715 233 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 RFC2P35250 354 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 PRKCEQ02156 737 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 RBL2Q08999 1139 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 TRAF7Q6Q0C0 670 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 MTHFD1LQ6UB35 978 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 DNAJB3Q8WWF6 145 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 VWCEQ96DN2 955 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 FAM167AQ96KS9 214 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 RNPC3Q96LT9 517 aaKnown RBP16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 PCDHB6Q9Y5E3 794 aa16.5■□□□□ 0.23
SH3TC1-216ENST00000508641 LAMA2P24043 3122 aaKnown RBP16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 ZBTB42B2RXF5 422 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 PSMC5P62195 406 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 SPIRE1Q08AE8 756 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 GPNMBQ14956 572 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 EPHA7Q15375 998 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 TAF2Q6P1X5 1199 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 PSRC1Q6PGN9 363 aaPredicted RBP16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 OTOP2Q7RTS6 562 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 RSPH3Q86UC2 560 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 RGL1Q9NZL6 768 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 PCDHA2Q9Y5H9 948 aa16.49■□□□□ 0.23
SH3TC1-216ENST00000508641 TMEM150BA6NC51 233 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 NBNO60934 754 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 P4HBP07237 508 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 OR52Z1P0C646 297 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 SYT1P21579 422 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 TECP42680 631 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 QARSP47897 775 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 ORC2Q13416 577 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 CTTNQ14247 550 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 MBTPS1Q14703 1052 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 DYDC2Q96IM9 177 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 SH2D3AQ9BRG2 576 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 SEPT9Q9UHD8 586 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 COL1A2P08123 1366 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 TANC1Q9C0D5 1861 aa16.48■□□□□ 0.23
SH3TC1-216ENST00000508641 SOX1O00570 391 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 STBD1O95210 358 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 C22orf31O95567 290 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 CHRNA1P02708 482 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 CYP4A11Q02928 519 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 TMEM62Q0P6H9 643 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 PTGDRQ13258 359 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 RILPL1Q5EBL4 403 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 XKR3Q5GH77 459 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 TPH2Q8IWU9 490 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 METTL13Q8N6R0 699 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 C4orf32Q8N8J7 132 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 TET1Q8NFU7 2136 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 CXXC1Q9P0U4 656 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 CEP131Q9UPN4 1083 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 LAMA3Q16787 3333 aa16.47■□□□□ 0.23
SH3TC1-216ENST00000508641 EVPLQ92817 2033 aa16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 POTEMA6NI47 508 aa16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 ZBBXA8MT70 800 aa16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 CAND2O75155 1236 aa16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 PARNO95453 639 aaKnown RBP16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 PFKMP08237 780 aa16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 ACTN1P12814 892 aa16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 LRIT3Q3SXY7 679 aa16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 MTERF2Q49AM1 385 aa16.46■□□□□ 0.23
SH3TC1-216ENST00000508641 HERVK_113Q902F9 699 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms